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K3XX16 (K3XX16_SETIT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1991Nucleophile By similarity PIRSR PIRSR001028-1
Active site2241Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
K3XX16 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 7A6ABCD674E108AC

FASTA43247,318
        10         20         30         40         50         60 
MGSMPLCCLS TLLLLGLASG QVLFQAFNWE SWKQSGGWYN LLMGKVDDIA AAGVTHVWLP 

        70         80         90        100        110        120 
PPAHSVSAQG YMPGRLYDLD ASKYGTAAEL RSLIAAFHGK GVQAVADIVI NHRCADYKDS 

       130        140        150        160        170        180 
RGIYCVFEGG TNDSRLDWGP HMICRDDTQY SDGTGNLDTG ASFAAAPDID HLNDRVQREL 

       190        200        210        220        230        240 
AEWLLWLRSD LGFDAWRLDF AKGYSAEVAR AYIDATAPSF AVAEIWSDMA YGGDGKPEYD 

       250        260        270        280        290        300 
QDPHRQALVD WVDKVGGAAS PATVFDFTTK GILNAAVEGE LWRLIDPRGK APGVIGWWPA 

       310        320        330        340        350        360 
KAVTFVDNHD TGSTQAVWPF PSDKVMQGYA YILTHPGNPC IFYDHFFDWG FKDEIAALMA 

       370        380        390        400        410        420 
VRKRNGITAT SELTILVYDG DAYVAEIDGK VIMKIGSRYD VSAFIPAGYQ VVAHGNDYAV 

       430 
WEKGAKEEVA QA 

« Hide

References

« Hide 'large scale' references
[1]"Foxtail millet: a sequence-driven grass model system."
Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Yugu1 EnsemblPlants Si006474m.
[2]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Yugu1 EnsemblPlants Si006474m.

Cross-references

Sequence databases

RefSeqXP_004965680.1. XM_004965623.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSi006474m; Si006474m; Si006474m.g.
GeneID101760405.
KEGGsita:101760405.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK3XX16_SETIT
AccessionPrimary (citable) accession number: K3XX16
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)