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K3XX03

- K3XX03_SETIT

UniProt

K3XX03 - K3XX03_SETIT

Protein

Alpha-amylase

Gene

Si006461m.g

Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei202 – 2021NucleophileUniRule annotation
    Active sitei227 – 2271Proton donorUniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:Si006461m.gImported
    Synonyms:Si008671m.gImported
    OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
    Taxonomic identifieri4555 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePaniceaeSetaria
    ProteomesiUP000004995: Genome, UP000004995: Unplaced

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    K3XX03-1 [UniParc]FASTAAdd to Basket

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    MGMGSRHMCC LSTLLLLLGL SSGQVLFQGF NWESSKQTGG WYNNLMGKVD    50
    DIAAAGVTHV WLPPPSHSVS SEGYMPGRLY DLDASKYGTA AELKSLIAAF 100
    HDKGVQAVAD IVINHRCADY KDSRGIYCIF EGGTPDSRLD WRAHMICRDD 150
    AKYSDGTGNL DTGADFPGAP DIDHLNDRVQ RELTEWMLWL KSDLGFDAWR 200
    LDFARGYSAE VARVYINGTA PSFVVAEIWD KMVPAGDDGK PAYDQDPHRQ 250
    ALVDWVDKVG GAASPATVFD FTTKGILNAA VEGELWRLID TEGKAPGVIG 300
    WWPAKAVTFV DNHDTGSTQA QWPFPHDKVM QGYAYILTHP GNPCIFYDHF 350
    FDWGFKDEIA ALVAVRKRNG ITPTSELTIL EHDGDAYVAE IDGKVIVKIG 400
    SRYDLGHLIP VGFEVATHGK DYAVWEKGGS EEVTRA 436
    Length:436
    Mass (Da):47,997
    Last modified:November 28, 2012 - v1
    Checksum:iF3284ECA2D0BC407
    GO

    Sequence databases

    RefSeqiXP_004966428.1. XM_004966371.1.
    XP_004966429.1. XM_004966372.1.

    Genome annotation databases

    EnsemblPlantsiSi006461m; Si006461m; Si006461m.g.
    Si008671m; Si008671m; Si008671m.g.
    GeneIDi101782965.
    101783371.
    KEGGisita:101782965.
    sita:101783371.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_004966428.1. XM_004966371.1.
    XP_004966429.1. XM_004966372.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Si006461m ; Si006461m ; Si006461m.g .
    Si008671m ; Si008671m ; Si008671m.g .
    GeneIDi 101782965.
    101783371.
    KEGGi sita:101782965.
    sita:101783371.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Foxtail millet: a sequence-driven grass model system."
      Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
      Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Yugu1Imported.
    2. EnsemblPlants
      Submitted (OCT-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Yugu1Imported.

    Entry informationi

    Entry nameiK3XX03_SETIT
    AccessioniPrimary (citable) accession number: K3XX03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3