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K3XX03 (K3XX03_SETIT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2021Nucleophile By similarity PIRSR PIRSR001028-1
Active site2271Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
K3XX03 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: F3284ECA2D0BC407

FASTA43647,997
        10         20         30         40         50         60 
MGMGSRHMCC LSTLLLLLGL SSGQVLFQGF NWESSKQTGG WYNNLMGKVD DIAAAGVTHV 

        70         80         90        100        110        120 
WLPPPSHSVS SEGYMPGRLY DLDASKYGTA AELKSLIAAF HDKGVQAVAD IVINHRCADY 

       130        140        150        160        170        180 
KDSRGIYCIF EGGTPDSRLD WRAHMICRDD AKYSDGTGNL DTGADFPGAP DIDHLNDRVQ 

       190        200        210        220        230        240 
RELTEWMLWL KSDLGFDAWR LDFARGYSAE VARVYINGTA PSFVVAEIWD KMVPAGDDGK 

       250        260        270        280        290        300 
PAYDQDPHRQ ALVDWVDKVG GAASPATVFD FTTKGILNAA VEGELWRLID TEGKAPGVIG 

       310        320        330        340        350        360 
WWPAKAVTFV DNHDTGSTQA QWPFPHDKVM QGYAYILTHP GNPCIFYDHF FDWGFKDEIA 

       370        380        390        400        410        420 
ALVAVRKRNG ITPTSELTIL EHDGDAYVAE IDGKVIVKIG SRYDLGHLIP VGFEVATHGK 

       430 
DYAVWEKGGS EEVTRA 

« Hide

References

« Hide 'large scale' references
[1]"Foxtail millet: a sequence-driven grass model system."
Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Yugu1 EnsemblPlants Si006461m EnsemblPlants Si008671m.
[2]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Yugu1 EnsemblPlants Si006461m EnsemblPlants Si008671m.

Cross-references

Sequence databases

RefSeqXP_004966428.1. XM_004966371.1.
XP_004966429.1. XM_004966372.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSi006461m; Si006461m; Si006461m.g.
Si008671m; Si008671m; Si008671m.g.
GeneID101782965.
101783371.
KEGGsita:101782965.
sita:101783371.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK3XX03_SETIT
AccessionPrimary (citable) accession number: K3XX03
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)