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K0PE95

- K0PE95_RHIML

UniProt

K0PE95 - K0PE95_RHIML

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Protein
Submitted name: DNA polymerase LigD ligase region
Gene
BN406_00784
Organism
Sinorhizobium meliloti Rm41
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD ligase regionImported
Gene namesi
ORF Names:BN406_00784Imported
OrganismiSinorhizobium meliloti Rm41Imported
Taxonomic identifieri1230587 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000006184: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0PE95-1 [UniParc]FASTAAdd to Basket

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MFSQPKESIR LFAGLCVNGL MTKASSKKPR YTPPIDPMPA RVDPCLAALV    50
TKPPKGPDWA YEVKWDGYRI AVHIEPGRVR ILTRGGYDWT ERFPTIVDDA 100
RRLAVKTAIL DGEAVVLDDL GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD 150
LLYLDGRDLR RLPLRERRRL LEPLVAGREG AVRLSEEVQA DGNEFFRVAC 200
QHGLEGIIAK HIEKPYRSGR GEWWQKITCK RRDSFVVVGF EPSTVPSHLG 250
RLLLAARKGD DLVYVGGCGT GWSHELSREL RKLLEGMVTK APAVALRRKG 300
AVFVDPVLAA EVEYRAWTDD WKLRHASFKG VRPREDEAAV FELP 344
Length:344
Mass (Da):38,615
Last modified:November 28, 2012 - v1
Checksum:i228EBEA239915B43
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE995405 Genomic DNA. Translation: CCM66829.1.
RefSeqiYP_006839655.1. NC_018700.1.

Genome annotation databases

EnsemblBacteriaiCCM66829; CCM66829; BN406_00784.
GeneIDi13775381.
KEGGismi:BN406_00784.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE995405 Genomic DNA. Translation: CCM66829.1 .
RefSeqi YP_006839655.1. NC_018700.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCM66829 ; CCM66829 ; BN406_00784 .
GeneIDi 13775381.
KEGGi smi:BN406_00784.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome Sequence of Sinorhizobium meliloti Rm41."
    Weidner S., Baumgarth B., Goettfert M., Jaenicke S., Puehler A., Schneiker-Bekel S., Serrania J., Szczepanowski R., Becker A.
    Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Rm41Imported.

Entry informationi

Entry nameiK0PE95_RHIML
AccessioniPrimary (citable) accession number: K0PE95
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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