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K0PE95 (K0PE95_RHIML) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BN406_00784 EMBL CCM66829.1
OrganismSinorhizobium meliloti Rm41 [Complete proteome] EMBL CCM66829.1
Taxonomic identifier1230587 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCM66829.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K0PE95 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 228EBEA239915B43

FASTA34438,615
        10         20         30         40         50         60 
MFSQPKESIR LFAGLCVNGL MTKASSKKPR YTPPIDPMPA RVDPCLAALV TKPPKGPDWA 

        70         80         90        100        110        120 
YEVKWDGYRI AVHIEPGRVR ILTRGGYDWT ERFPTIVDDA RRLAVKTAIL DGEAVVLDDL 

       130        140        150        160        170        180 
GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD LLYLDGRDLR RLPLRERRRL LEPLVAGREG 

       190        200        210        220        230        240 
AVRLSEEVQA DGNEFFRVAC QHGLEGIIAK HIEKPYRSGR GEWWQKITCK RRDSFVVVGF 

       250        260        270        280        290        300 
EPSTVPSHLG RLLLAARKGD DLVYVGGCGT GWSHELSREL RKLLEGMVTK APAVALRRKG 

       310        320        330        340 
AVFVDPVLAA EVEYRAWTDD WKLRHASFKG VRPREDEAAV FELP 

« Hide

References

[1]"Genome Sequence of Sinorhizobium meliloti Rm41."
Weidner S., Baumgarth B., Goettfert M., Jaenicke S., Puehler A., Schneiker-Bekel S., Serrania J., Szczepanowski R., Becker A.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Rm41 EMBL CCM66829.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE995405 Genomic DNA. Translation: CCM66829.1.
RefSeqYP_006839655.1. NC_018700.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCM66829; CCM66829; BN406_00784.
GeneID13775381.
KEGGsmi:BN406_00784.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0PE95_RHIML
AccessionPrimary (citable) accession number: K0PE95
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)