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K0PE95

- K0PE95_RHIML

UniProt

K0PE95 - K0PE95_RHIML

Protein
Submitted name:

DNA polymerase LigD ligase region

Gene

BN406_00784

Organism
Sinorhizobium meliloti Rm41
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD ligase regionImported
    Gene namesi
    ORF Names:BN406_00784Imported
    OrganismiSinorhizobium meliloti Rm41Imported
    Taxonomic identifieri1230587 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000006184: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0PE95-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFSQPKESIR LFAGLCVNGL MTKASSKKPR YTPPIDPMPA RVDPCLAALV    50
    TKPPKGPDWA YEVKWDGYRI AVHIEPGRVR ILTRGGYDWT ERFPTIVDDA 100
    RRLAVKTAIL DGEAVVLDDL GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD 150
    LLYLDGRDLR RLPLRERRRL LEPLVAGREG AVRLSEEVQA DGNEFFRVAC 200
    QHGLEGIIAK HIEKPYRSGR GEWWQKITCK RRDSFVVVGF EPSTVPSHLG 250
    RLLLAARKGD DLVYVGGCGT GWSHELSREL RKLLEGMVTK APAVALRRKG 300
    AVFVDPVLAA EVEYRAWTDD WKLRHASFKG VRPREDEAAV FELP 344
    Length:344
    Mass (Da):38,615
    Last modified:November 28, 2012 - v1
    Checksum:i228EBEA239915B43
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE995405 Genomic DNA. Translation: CCM66829.1.
    RefSeqiYP_006839655.1. NC_018700.1.

    Genome annotation databases

    EnsemblBacteriaiCCM66829; CCM66829; BN406_00784.
    GeneIDi13775381.
    KEGGismi:BN406_00784.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE995405 Genomic DNA. Translation: CCM66829.1 .
    RefSeqi YP_006839655.1. NC_018700.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCM66829 ; CCM66829 ; BN406_00784 .
    GeneIDi 13775381.
    KEGGi smi:BN406_00784.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome Sequence of Sinorhizobium meliloti Rm41."
      Weidner S., Baumgarth B., Goettfert M., Jaenicke S., Puehler A., Schneiker-Bekel S., Serrania J., Szczepanowski R., Becker A.
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Rm41Imported.

    Entry informationi

    Entry nameiK0PE95_RHIML
    AccessioniPrimary (citable) accession number: K0PE95
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3