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K0PBH6 (K0PBH6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-DPB1 EMBL CCM44320.1
OrganismHomo sapiens (Human) EMBL CCM44320.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length181 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS014745

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CCM44320.1
Non-terminal residue1811 EMBL CCM44320.1

Sequences

Sequence LengthMass (Da)Tools
K0PBH6 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 312DCA7102C65AFC

FASTA18121,240
        10         20         30         40         50         60 
NYLFQGRQEC YAFNGTQRFL ERYIYNREEF VRFDSDVGEF RAVTELGRPD EEYWNSQKDI 

        70         80         90        100        110        120 
LEEERAVPDR MCRHNYELGG PMTLQRRVQP RVNVSPSKKG PLQHHNLLVC HVTDFYPGSI 

       130        140        150        160        170        180 
QVQWFLNGQE ETAGVVSTNL IRNGDWTFQI LVMLEMTPQQ GDVYTCQVEH TSLDSPVTVE 


W 

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References

[1]"Characterisation and Confirmation of new HLA-Alleles found by DKMS Life Science Lab."
Albrecht V., Boehme I., Schmidt A.H.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE995399 Genomic DNA. Translation: CCM44320.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR000353. MHC_II_b_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00969. MHC_II_beta. 1 hit.
[Graphical view]
ProDomPD000328. MHC_II_b_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00407. IGc1. 1 hit.
SM00921. MHC_II_beta. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0PBH6_HUMAN
AccessionPrimary (citable) accession number: K0PBH6
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: February 19, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.