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Protein
Submitted name:

PdhC protein

Gene

pdhC

Organism
Cardinium endosymbiont cEper1 of Encarsia pergandiella
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AcyltransferaseUniRule annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
PdhC proteinImported (EC:2.3.1.12Imported)
Gene namesi
Name:pdhCImported
ORF Names:CAHE_0047Imported
OrganismiCardinium endosymbiont cEper1 of Encarsia pergandiellaImported
Taxonomic identifieri1231626 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesAmoebophilaceaeCandidatus Cardinium
ProteomesiUP000003996 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the 2-oxoacid dehydrogenase family.UniRule annotation

Keywords - Domaini

LipoylUniRule annotation

Phylogenomic databases

KOiK00627.

Family and domain databases

Gene3Di3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProiIPR001078. 2-oxoacid_DH_actylTfrase.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamiPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMiSSF47005. SSF47005. 1 hit.
SSF51230. SSF51230. 1 hit.
PROSITEiPS50968. BIOTINYL_LIPOYL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0P1S8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAECIRMPKM SDTMEYGIVS RWIKQVGDKV VAGDILAEVD TDKATMELES
60 70 80 90 100
YEDGTLLYVG VAERAAARIN DIIAIIGDPE EDINTLLAST VAIDGDRPAD
110 120 130 140 150
TRIDLPLPIV DDQPVVPTAH MQSHLPLERS IASPLAKKIA KEKGYDLSQI
160 170 180 190 200
QGSGEAGRII KKDVIHFVPN RLDQFSISEQ STRTAYQDFP ISAMRQKIAE
210 220 230 240 250
VLTESKMNIP HFYLTVDINM NKLVEIRAEL NQYASTKISI NDLIIKATAL
260 270 280 290 300
ALIQHPKVNA AWLTDKIRSY QYVHIGVAVA VEDGLMVPVV RFADQKPLVQ
310 320 330 340 350
ISKTVKILSK QAQQKTLTPK DYTGATFTIS NLGMFGITSF SAIINPPAAC
360 370 380 390 400
ILAIGAMQQI PIFKDNQVVP AHMLQLTLSC DHRVVDGHAG ALFLATLKTL

LEQPLSLLL
Length:409
Mass (Da):44,949
Last modified:November 28, 2012 - v1
Checksum:i9938747A87A85541
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE983995 Genomic DNA. Translation: CCM09829.1.
RefSeqiWP_014934203.1. NC_018605.1.
YP_006705249.1. NC_018605.1.

Genome annotation databases

EnsemblBacteriaiCCM09829; CCM09829; CAHE_0047.
KEGGiche:CAHE_0047.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE983995 Genomic DNA. Translation: CCM09829.1.
RefSeqiWP_014934203.1. NC_018605.1.
YP_006705249.1. NC_018605.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCM09829; CCM09829; CAHE_0047.
KEGGiche:CAHE_0047.

Phylogenomic databases

KOiK00627.

Family and domain databases

Gene3Di3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProiIPR001078. 2-oxoacid_DH_actylTfrase.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamiPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMiSSF47005. SSF47005. 1 hit.
SSF51230. SSF51230. 1 hit.
PROSITEiPS50968. BIOTINYL_LIPOYL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative Genomics Suggests an Independent Origin of Cytoplasmic Incompatibility in Cardinium hertigii."
    Penz T., Schmitz-Esser S., Kelly S.E., Cass B.N., Muller A., Woyke T., Malfatti S.A., Hunter M.S., Horn M.
    PLoS Genet. 8:e1003012-e1003012(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CEper1Imported.

Entry informationi

Entry nameiK0P1S8_9BACT
AccessioniPrimary (citable) accession number: K0P1S8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 29, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.