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Protein
Submitted name:

Desulfobacula toluolica Tol2 complete genome

Gene

TOL2_C10600

Organism
Desulfobacula toluolica (strain DSM 7467 / Tol2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Desulfobacula toluolica Tol2 complete genomeImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:TOL2_C10600Imported
OrganismiDesulfobacula toluolica (strain DSM 7467 / Tol2)Imported
Taxonomic identifieri651182 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfobacula
ProteomesiUP000007347 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

K0NEB9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIRNKQYP LVADWNTLNR VFIRPEDEIG RKTLVKYMEQ ILFGLHDFLN
60 70 80 90 100
KHVGVTEEIS LIKLAEEYTD TKINAHPQKK LADVIKDIIN EIAPRAVNVA
110 120 130 140 150
SPYFIGHMTS AIPFFMVHLK AITAALNQNV IKLETSKVLS VLEKQILAKM
160 170 180 190 200
HRMIFNFDDH FYLEHVQNTE TSLGNFTTGG TTANLTALWV ARNKCFPSKG
210 220 230 240 250
NFESIEKNGI FEAMKTHDLE KAVVLVSKRG HYSLRKAGGV LGLGNQNVIP
260 270 280 290 300
IDVDANRTID IIKLKSKIKE LQANKKTKIV AIIGIAGATE TGIIDPLPKL
310 320 330 340 350
ADICQKHGIH FHVDAAWGGP VLLSEKYCHL LKGIERADSV AIDCHKQFYM
360 370 380 390 400
PMTSGMVYFK DPTAMDHIVY HSSYVNRPGS VDLGIKTLEG SREANSLILD
410 420 430 440 450
SALKIMGSKG YALMIDHGIE TAREFAKMIS QRSLFQLVTK PQLNILTYRL
460 470 480 490 500
VPLDIQKKLE TADKEERQKL NYILDDINIK IQRIQREAGK SFVSRTRLKN
510 520 530 540
SPDDYNNNVV LRSVIMNPMT NIDIINEVLD EQESIFHKLV NE
Length:542
Mass (Da):61,211
Last modified:November 28, 2012 - v1
Checksum:i3C1B009E62D0DC23
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO203503 Genomic DNA. Translation: CCK79225.1.
RefSeqiWP_014956572.1. NC_018645.1.
YP_006759929.1. NC_018645.1.

Genome annotation databases

EnsemblBacteriaiCCK79225; CCK79225; TOL2_C10600.
KEGGidto:TOL2_C10600.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO203503 Genomic DNA. Translation: CCK79225.1.
RefSeqiWP_014956572.1. NC_018645.1.
YP_006759929.1. NC_018645.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCK79225; CCK79225; TOL2_C10600.
KEGGidto:TOL2_C10600.

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica To12 marine, aromatic compound-degrading, sulfate-reducing bacterium."
    Wohlbrand L., Jacob J.H., Kube M., Mussmann M., Jarling R., Beck A., Amann R., Wilkes H., Reinhardt R., Rabus R.
    Environ. Microbiol. 15:1334-1355(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 7467 / Tol2Imported.

Entry informationi

Entry nameiK0NEB9_DESTT
AccessioniPrimary (citable) accession number: K0NEB9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 27, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.