K0NEB9 (K0NEB9_DESTT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase family protein EMBL CCK79225.1
EC=4.1.1.15 EMBL CCK79225.1

Gene names

Ordered Locus Names:

TOL2_C10600 EMBL CCK79225.1

Organism

Desulfobacula toluolica (strain DSM 7467 / Tol2) [Complete proteome] [HAMAP] EMBL CCK79225.1

Taxonomic identifier

651182 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfobacterales › Desulfobacteraceae › Desulfobacula › Desulfobacula toluolica

Protein attributes

Sequence length	542 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CCK79225.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	K0NEB9 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: 3C1B009E62D0DC23	FASTA	542	61,211
	10 20 30 40 50 60 MVKIRNKQYP LVADWNTLNR VFIRPEDEIG RKTLVKYMEQ ILFGLHDFLN KHVGVTEEIS 70 80 90 100 110 120 LIKLAEEYTD TKINAHPQKK LADVIKDIIN EIAPRAVNVA SPYFIGHMTS AIPFFMVHLK 130 140 150 160 170 180 AITAALNQNV IKLETSKVLS VLEKQILAKM HRMIFNFDDH FYLEHVQNTE TSLGNFTTGG 190 200 210 220 230 240 TTANLTALWV ARNKCFPSKG NFESIEKNGI FEAMKTHDLE KAVVLVSKRG HYSLRKAGGV 250 260 270 280 290 300 LGLGNQNVIP IDVDANRTID IIKLKSKIKE LQANKKTKIV AIIGIAGATE TGIIDPLPKL 310 320 330 340 350 360 ADICQKHGIH FHVDAAWGGP VLLSEKYCHL LKGIERADSV AIDCHKQFYM PMTSGMVYFK 370 380 390 400 410 420 DPTAMDHIVY HSSYVNRPGS VDLGIKTLEG SREANSLILD SALKIMGSKG YALMIDHGIE 430 440 450 460 470 480 TAREFAKMIS QRSLFQLVTK PQLNILTYRL VPLDIQKKLE TADKEERQKL NYILDDINIK 490 500 510 520 530 540 IQRIQREAGK SFVSRTRLKN SPDDYNNNVV LRSVIMNPMT NIDIINEVLD EQESIFHKLV NE

References

[1]

"Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium." Wohlbrand L., Kube M., Mussmann M., Jarling R., Beck A., Amann R., Wilkes H., Reinhardt R., Rabus R. Environ. Microbiol. 0:0-0(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 7467 / Tol2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO203503 Genomic DNA. Translation: CCK79225.1.
RefSeq	YP_006759929.1. NC_018645.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCK79225; CCK79225; TOL2_C10600.
GeneID	13677839.
KEGG	dto:TOL2_C10600.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

K0NEB9_DESTT

Accession

Primary (citable) accession number: K0NEB9

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)