Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

K0MY22

- K0MY22_BORBM

UniProt

K0MY22 - K0MY22_BORBM

Protein

Glutamate decarboxylase

Gene

BN115_2465

Organism
Bordetella bronchiseptica (strain MO149)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:BN115_2465Imported
    OrganismiBordetella bronchiseptica (strain MO149)Imported
    Taxonomic identifieri1208658 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
    ProteomesiUP000008036: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OMAiKLVWAEL.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    K0MY22-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKSPEQMTP YDQFNIEVPE DHFPVEGMSA RAAQALVLSD EWTDTNPMLN    50
    MSSFVTTFAE PEAVRIAEKN MYKNYIDHDM YPQLFAMEQR MVRWLHQLWN 100
    GPKDVEPYGT ATIGSSEACM LAGLAHKWNW RQRREREGKD ATRPNMVTGG 150
    NVQIVWKKFL RYFDVEPRIV PLKPGQYCLT AEDLDKYVDE NTIAVVAIAG 200
    QTFTGEDDDI QGIHDWLDAY EKKTGVSVPM HIDGASGGFV NPFLYPDYKW 250
    DFRLPRVQSI NASGHKYGLT PPGLGWVIFR ERKVFNEDLV FYVNYLGGEM 300
    PTATLNFSRN SFQVAVQYYQ FLRLGFDGFK RVMQRTLDNA IALRQHLVDS 350
    GYFTIMNDTQ RIPVVAVTLD PKIKKFNEFD VSNKVRERGW VISAYTMPPD 400
    AESVRSLRVV VRPHINRNVA LLLAEDIVKA CKYLEQHGGT ATPPALHDAH 450
    KSSPAKC 457
    Length:457
    Mass (Da):52,162
    Last modified:November 28, 2012 - v1
    Checksum:i01C84301A5B10565
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE965807 Genomic DNA. Translation: CCJ59221.1.
    RefSeqiWP_003817282.1. NC_018829.1.
    YP_006900699.1. NC_018829.1.

    Genome annotation databases

    EnsemblBacteriaiCCJ59221; CCJ59221; BN115_2465.
    GeneIDi13895059.
    KEGGibbm:BN115_2465.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE965807 Genomic DNA. Translation: CCJ59221.1 .
    RefSeqi WP_003817282.1. NC_018829.1.
    YP_006900699.1. NC_018829.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCJ59221 ; CCJ59221 ; BN115_2465 .
    GeneIDi 13895059.
    KEGGi bbm:BN115_2465.

    Phylogenomic databases

    KOi K01580.
    OMAi KLVWAEL.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
      Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
      BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MO149Imported.

    Entry informationi

    Entry nameiK0MY22_BORBM
    AccessioniPrimary (citable) accession number: K0MY22
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3