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K0MY22 (K0MY22_BORBM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CCJ59221.1
Gene names
Ordered Locus Names:BN115_2465 EMBL CCJ59221.1
OrganismBordetella bronchiseptica (strain MO149) [Complete proteome] [HAMAP] EMBL CCJ59221.1
Taxonomic identifier1208658 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
K0MY22 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 01C84301A5B10565

FASTA45752,162
        10         20         30         40         50         60 
MSKSPEQMTP YDQFNIEVPE DHFPVEGMSA RAAQALVLSD EWTDTNPMLN MSSFVTTFAE 

        70         80         90        100        110        120 
PEAVRIAEKN MYKNYIDHDM YPQLFAMEQR MVRWLHQLWN GPKDVEPYGT ATIGSSEACM 

       130        140        150        160        170        180 
LAGLAHKWNW RQRREREGKD ATRPNMVTGG NVQIVWKKFL RYFDVEPRIV PLKPGQYCLT 

       190        200        210        220        230        240 
AEDLDKYVDE NTIAVVAIAG QTFTGEDDDI QGIHDWLDAY EKKTGVSVPM HIDGASGGFV 

       250        260        270        280        290        300 
NPFLYPDYKW DFRLPRVQSI NASGHKYGLT PPGLGWVIFR ERKVFNEDLV FYVNYLGGEM 

       310        320        330        340        350        360 
PTATLNFSRN SFQVAVQYYQ FLRLGFDGFK RVMQRTLDNA IALRQHLVDS GYFTIMNDTQ 

       370        380        390        400        410        420 
RIPVVAVTLD PKIKKFNEFD VSNKVRERGW VISAYTMPPD AESVRSLRVV VRPHINRNVA 

       430        440        450 
LLLAEDIVKA CKYLEQHGGT ATPPALHDAH KSSPAKC 

« Hide

References

[1]"Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MO149 EMBL CCJ59221.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE965807 Genomic DNA. Translation: CCJ59221.1.
RefSeqYP_006900699.1. NC_018829.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCJ59221; CCJ59221; BN115_2465.
GeneID13895059.
KEGGbbm:BN115_2465.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAKLVWAEL.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK0MY22_BORBM
AccessionPrimary (citable) accession number: K0MY22
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 14, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)