K0MY22 (K0MY22_BORBM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL CCJ59221.1
EC=4.1.1.15 EMBL CCJ59221.1

Gene names

Ordered Locus Names:

BN115_2465 EMBL CCJ59221.1

Organism

Bordetella bronchiseptica (strain MO149) [Complete proteome] [HAMAP] EMBL CCJ59221.1

Taxonomic identifier

1208658 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella › Bordetella bronchiseptica

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CCJ59221.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	K0MY22 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: 01C84301A5B10565	FASTA	457	52,162
	10 20 30 40 50 60 MSKSPEQMTP YDQFNIEVPE DHFPVEGMSA RAAQALVLSD EWTDTNPMLN MSSFVTTFAE 70 80 90 100 110 120 PEAVRIAEKN MYKNYIDHDM YPQLFAMEQR MVRWLHQLWN GPKDVEPYGT ATIGSSEACM 130 140 150 160 170 180 LAGLAHKWNW RQRREREGKD ATRPNMVTGG NVQIVWKKFL RYFDVEPRIV PLKPGQYCLT 190 200 210 220 230 240 AEDLDKYVDE NTIAVVAIAG QTFTGEDDDI QGIHDWLDAY EKKTGVSVPM HIDGASGGFV 250 260 270 280 290 300 NPFLYPDYKW DFRLPRVQSI NASGHKYGLT PPGLGWVIFR ERKVFNEDLV FYVNYLGGEM 310 320 330 340 350 360 PTATLNFSRN SFQVAVQYYQ FLRLGFDGFK RVMQRTLDNA IALRQHLVDS GYFTIMNDTQ 370 380 390 400 410 420 RIPVVAVTLD PKIKKFNEFD VSNKVRERGW VISAYTMPPD AESVRSLRVV VRPHINRNVA 430 440 450 LLLAEDIVKA CKYLEQHGGT ATPPALHDAH KSSPAKC

References

[1]

"Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens." Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T. BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MO149 EMBL CCJ59221.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE965807 Genomic DNA. Translation: CCJ59221.1.
RefSeq	YP_006900699.1. NC_018829.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCJ59221; CCJ59221; BN115_2465.
GeneID	13895059.
KEGG	bbm:BN115_2465.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

K0MY22_BORBM

Accession

Primary (citable) accession number: K0MY22

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	April 3, 2013
This is version 4 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)