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K0MPA1 (K0MPA1_BORPB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.1.3 EMBL CCJ51576.1
Gene names
Ordered Locus Names:BN117_4243 EMBL CCJ51576.1
OrganismBordetella parapertussis (strain Bpp5) [Complete proteome] [HAMAP] EMBL CCJ51576.1
Taxonomic identifier1208660 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length486 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU003344 EMBL CCJ51576.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionaldehyde dehydrogenase (NAD) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K0MPA1 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 1FA21C724A1FF1FF

FASTA48652,128
        10         20         30         40         50         60 
MEDLRNHEFK NYIGGQWVAC AAGKTYPNVN PADTDDIVGR FQASQAEDAA AAVAAAQAAF 

        70         80         90        100        110        120 
DGWRNLAVSK RAALMQRAAD YLEAHAEQFG RELTREEGKA LNLAKDEVLR SAQTIRFYAA 

       130        140        150        160        170        180 
EGQSFSGETF VNDDPDMVVY SQREPLGVVT VISPWNFPVS IPARKIAPAL ITGNTVVFKP 

       190        200        210        220        230        240 
SSDAPLSGLR LVEAFEQAGL PPGVLNLVTG SASAIGAAIT QAPQVRAVSF TGSTAAGEQI 

       250        260        270        280        290        300 
HRSVDMTTRT QMELGGKNPL IVMADADLDR AVDLVVKGGF SLSGQACTGT SRVLVDAPVK 

       310        320        330        340        350        360 
AAFTEKLLAK VKALKVGNSL EGSFDLGPLA TARQLESVMR YIEVSKQEAR LLYGGERLDG 

       370        380        390        400        410        420 
PGYERGYYLT PAVFADVTQQ MRIAREEIFG PVIALIEVNG YEDAIAKAND TEYGLAAAIA 

       430        440        450        460        470        480 
TTNAQYAHRF ARDIQAGTVK INRTTTGNLI NAPFGGLKRS STSTFRESGR IGLEFYTQIK 


TVYRAG 

« Hide

References

[1]"Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bpp5 EMBL CCJ51576.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE965803 Genomic DNA. Translation: CCJ51576.1.
RefSeqYP_006897972.1. NC_018828.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCJ51576; CCJ51576; BN117_4243.
GeneID13892280.
KEGGbpar:BN117_4243.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00128.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0MPA1_BORPB
AccessionPrimary (citable) accession number: K0MPA1
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)