Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

K0MA42 (K0MA42_BORPB) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595 EMBL CCJ47748.1
Ordered Locus Names:BN117_0415 EMBL CCJ47748.1
OrganismBordetella parapertussis (strain Bpp5) [Complete proteome] [HAMAP] EMBL CCJ47748.1
Taxonomic identifier1208660 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length982 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS021135

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1821 By similarity HAMAP-Rule MF_00595
Active site6271 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
K0MA42 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 4CC69FF3516F807D

FASTA982107,941
        10         20         30         40         50         60 
MAAYNAPVSN CQFRLTHILP IPQRQGAPTD PFQMNAIRQQ SDSAEPLRHD IRLLGRCLGE 

        70         80         90        100        110        120 
VIQACEGKRV YDTIETLRRT AVRFRRAGDP ADDKLLQARV KQLRGNDPNS VARAFSYFLH 

       130        140        150        160        170        180 
LSNIAEDRDQ NRRQRDRALA GAGPERGSLR QAIESLKAQG VNNARIRRLL SEACVMPVLT 

       190        200        210        220        230        240 
AHPTEVQRKS TLDVHREISS LLVQRERELT ADELSELDLA LIGQVATLWQ TRMLRYTRLT 

       250        260        270        280        290        300 
VADEIENALS YYRSTFLNVI PRVYGDLARL LNREPVKPFT PPPPPLEPFL RMGSWIGGDR 

       310        320        330        340        350        360 
DGNPNVDAAT LERALLRQAT VLFEHYLQEV HALGAELSAS TLLIEADPAL LALADAGGDD 

       370        380        390        400        410        420 
SPHRRDEPYR RALIGIYARL AATARHLTGQ ELARRATVPA APYDTPDALA ADLAVIAASL 

       430        440        450        460        470        480 
SAHHGAPIAR LRLSGLQQAV TVFGFHLATV DLRQSSDVHE RVLAELFARA GDGIDGQAVD 

       490        500        510        520        530        540 
YLALDEAARV AVLRRELAHA RPLASPWIAY SEETASELAV LRAAAAGRAR YGIQAVLQSI 

       550        560        570        580        590        600 
VSHTETLSDL LEVLVLQKEA GLIAPPGETI APGDGLMVVP LFETIPDLQR GPEIMAAWLD 

       610        620        630        640        650        660 
LPEVRQRVRL AQGDTQEVML GYSDSNKDGG FLTSNWSLYQ AERALVDVFS ARSVRLRMFH 

       670        680        690        700        710        720 
GRGGSVGRGG GSSYDAILAQ PPGTVAGQLR LTEQGEVIQS KYKDAEVGRW HLELLVAATL 

       730        740        750        760        770        780 
ESSLAPQAAA TSAEDAHMQQ HAPAMSFMSE LAQRTYRGLV YDTPGFADYF FAATPISEIA 

       790        800        810        820        830        840 
GLNIGSRPAS RKKGQHIEDL RAIPWGFSWA QCRLMLTGWY GMGAAIEAYL ETGAQGAPRS 

       850        860        870        880        890        900 
RRARLAQLRE MASDWPAFRT LLSNMEMVLA KSDLAIAAGY AQLVPRRGLR ERVFGAITAE 

       910        920        930        940        950        960 
HGRTLAMLRL LTRRELLADN PGLMASLRER FAYIDPLNYL QIELIKRHRA AQRRAGDDAD 

       970        980 
IRVPRAIHLT INGIAAGLRN SG 

« Hide

References

[1]"Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bpp5 EMBL CCJ47748.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE965803 Genomic DNA. Translation: CCJ47748.1.
RefSeqYP_006894480.1. NC_018828.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCJ47748; CCJ47748; BN117_0415.
GeneID13888451.
KEGGbpar:BN117_0415.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01595.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0MA42_BORPB
AccessionPrimary (citable) accession number: K0MA42
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: February 19, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)