Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

K0JWB5

- K0JWB5_SACES

UniProt

K0JWB5 - K0JWB5_SACES

Protein
Submitted name:

DNA polymerase LigD, ligase domain-containing protein

Gene

BN6_24580

Organism
Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain-containing proteinImported
    Gene namesi
    Ordered Locus Names:BN6_24580Imported
    OrganismiSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)Imported
    Taxonomic identifieri1179773 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharothrix
    ProteomesiUP000006281: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0JWB5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTGLLPWSLG PTLKPIADNC RPRFGARVKN PFSAYAPPVD LPVMPPVRPM    50
    LAKAVREVPR EPGLVYEPKW DGFRCVVFRD GDELELGSRN DRPLTRYFPE 100
    VADLLANGLP ARCVVDGEVV IVTPDGLSFD LLQLRLHPAA SRVRKLAAET 150
    PASFVAFDLL ALGDRDLTGV PFGERRALLA EALTETPGLY LTPATDDPDV 200
    AQDWFTRFEG AGFDGVVAKR TDLPYEQDRR VMWKVKHERT ADCVVAGYRT 250
    HKDGEGVGSL VLGLYDDEGT LHHVGVASSF TATRRRELVA ELEPYRARAL 300
    DDHPWGEWAR LDAATPGAQS RWAPDKTLSW EPLRPELVAE VRYEHVQGTR 350
    FRHTARLVRF RPDRTPDSCT YRQLEEVPPA ELTEMFRP 388
    Length:388
    Mass (Da):43,512
    Last modified:November 28, 2012 - v1
    Checksum:i3874DB76CA8FD552
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE804045 Genomic DNA. Translation: CCH29772.1.
    RefSeqiYP_007036645.1. NC_019673.1.

    Genome annotation databases

    EnsemblBacteriaiCCH29772; CCH29772; BN6_24580.
    GeneIDi14346898.
    KEGGisesp:BN6_24580.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE804045 Genomic DNA. Translation: CCH29772.1 .
    RefSeqi YP_007036645.1. NC_019673.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCH29772 ; CCH29772 ; BN6_24580 .
    GeneIDi 14346898.
    KEGGi sesp:BN6_24580.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae."
      Strobel T., Al-Dilaimi A., Blom J., Gessner A., Kalinowski J., Luzhetska M., Puhler A., Szczepanowski R., Bechthold A., Ruckert C.
      BMC Genomics 13:465-465(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764Imported.

    Entry informationi

    Entry nameiK0JWB5_SACES
    AccessioniPrimary (citable) accession number: K0JWB5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3