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K0JWB5 (K0JWB5_SACES) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BN6_24580 EMBL CCH29772.1
OrganismSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) [Complete proteome] [HAMAP] EMBL CCH29772.1
Taxonomic identifier1179773 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharothrix

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
K0JWB5 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 3874DB76CA8FD552

FASTA38843,512
        10         20         30         40         50         60 
MTGLLPWSLG PTLKPIADNC RPRFGARVKN PFSAYAPPVD LPVMPPVRPM LAKAVREVPR 

        70         80         90        100        110        120 
EPGLVYEPKW DGFRCVVFRD GDELELGSRN DRPLTRYFPE VADLLANGLP ARCVVDGEVV 

       130        140        150        160        170        180 
IVTPDGLSFD LLQLRLHPAA SRVRKLAAET PASFVAFDLL ALGDRDLTGV PFGERRALLA 

       190        200        210        220        230        240 
EALTETPGLY LTPATDDPDV AQDWFTRFEG AGFDGVVAKR TDLPYEQDRR VMWKVKHERT 

       250        260        270        280        290        300 
ADCVVAGYRT HKDGEGVGSL VLGLYDDEGT LHHVGVASSF TATRRRELVA ELEPYRARAL 

       310        320        330        340        350        360 
DDHPWGEWAR LDAATPGAQS RWAPDKTLSW EPLRPELVAE VRYEHVQGTR FRHTARLVRF 

       370        380 
RPDRTPDSCT YRQLEEVPPA ELTEMFRP 

« Hide

References

[1]"Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae."
Strobel T., Al-Dilaimi A., Blom J., Gessner A., Kalinowski J., Luzhetska M., Puhler A., Szczepanowski R., Bechthold A., Ruckert C.
BMC Genomics 13:465-465(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE804045 Genomic DNA. Translation: CCH29772.1.
RefSeqYP_007036645.1. NC_019673.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCH29772; CCH29772; BN6_24580.
GeneID14346898.
KEGGsesp:BN6_24580.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0JWB5_SACES
AccessionPrimary (citable) accession number: K0JWB5
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)