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K0JWB5

- K0JWB5_SACES

UniProt

K0JWB5 - K0JWB5_SACES

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Protein
Submitted name: DNA polymerase LigD, ligase domain-containing protein
Gene
BN6_24580
Organism
Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain-containing proteinImported
Gene namesi
Ordered Locus Names:BN6_24580Imported
OrganismiSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)Imported
Taxonomic identifieri1179773 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharothrix
ProteomesiUP000006281: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0JWB5-1 [UniParc]FASTAAdd to Basket

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MTGLLPWSLG PTLKPIADNC RPRFGARVKN PFSAYAPPVD LPVMPPVRPM    50
LAKAVREVPR EPGLVYEPKW DGFRCVVFRD GDELELGSRN DRPLTRYFPE 100
VADLLANGLP ARCVVDGEVV IVTPDGLSFD LLQLRLHPAA SRVRKLAAET 150
PASFVAFDLL ALGDRDLTGV PFGERRALLA EALTETPGLY LTPATDDPDV 200
AQDWFTRFEG AGFDGVVAKR TDLPYEQDRR VMWKVKHERT ADCVVAGYRT 250
HKDGEGVGSL VLGLYDDEGT LHHVGVASSF TATRRRELVA ELEPYRARAL 300
DDHPWGEWAR LDAATPGAQS RWAPDKTLSW EPLRPELVAE VRYEHVQGTR 350
FRHTARLVRF RPDRTPDSCT YRQLEEVPPA ELTEMFRP 388
Length:388
Mass (Da):43,512
Last modified:November 28, 2012 - v1
Checksum:i3874DB76CA8FD552
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE804045 Genomic DNA. Translation: CCH29772.1.
RefSeqiYP_007036645.1. NC_019673.1.

Genome annotation databases

EnsemblBacteriaiCCH29772; CCH29772; BN6_24580.
GeneIDi14346898.
KEGGisesp:BN6_24580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE804045 Genomic DNA. Translation: CCH29772.1 .
RefSeqi YP_007036645.1. NC_019673.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCH29772 ; CCH29772 ; BN6_24580 .
GeneIDi 14346898.
KEGGi sesp:BN6_24580.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae."
    Strobel T., Al-Dilaimi A., Blom J., Gessner A., Kalinowski J., Luzhetska M., Puhler A., Szczepanowski R., Bechthold A., Ruckert C.
    BMC Genomics 13:465-465(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764.

Entry informationi

Entry nameiK0JWB5_SACES
AccessioniPrimary (citable) accession number: K0JWB5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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