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K0JWB5

- K0JWB5_SACES

UniProt

K0JWB5 - K0JWB5_SACES

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Protein
Submitted name:

DNA polymerase LigD, ligase domain-containing protein

Gene

BN6_24580

Organism
Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain-containing proteinImported
Gene namesi
Ordered Locus Names:BN6_24580Imported
OrganismiSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)Imported
Taxonomic identifieri1179773 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharothrix
ProteomesiUP000006281: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0JWB5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTGLLPWSLG PTLKPIADNC RPRFGARVKN PFSAYAPPVD LPVMPPVRPM
60 70 80 90 100
LAKAVREVPR EPGLVYEPKW DGFRCVVFRD GDELELGSRN DRPLTRYFPE
110 120 130 140 150
VADLLANGLP ARCVVDGEVV IVTPDGLSFD LLQLRLHPAA SRVRKLAAET
160 170 180 190 200
PASFVAFDLL ALGDRDLTGV PFGERRALLA EALTETPGLY LTPATDDPDV
210 220 230 240 250
AQDWFTRFEG AGFDGVVAKR TDLPYEQDRR VMWKVKHERT ADCVVAGYRT
260 270 280 290 300
HKDGEGVGSL VLGLYDDEGT LHHVGVASSF TATRRRELVA ELEPYRARAL
310 320 330 340 350
DDHPWGEWAR LDAATPGAQS RWAPDKTLSW EPLRPELVAE VRYEHVQGTR
360 370 380
FRHTARLVRF RPDRTPDSCT YRQLEEVPPA ELTEMFRP
Length:388
Mass (Da):43,512
Last modified:November 28, 2012 - v1
Checksum:i3874DB76CA8FD552
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE804045 Genomic DNA. Translation: CCH29772.1.
RefSeqiYP_007036645.1. NC_019673.1.

Genome annotation databases

EnsemblBacteriaiCCH29772; CCH29772; BN6_24580.
GeneIDi14346898.
KEGGisesp:BN6_24580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE804045 Genomic DNA. Translation: CCH29772.1 .
RefSeqi YP_007036645.1. NC_019673.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCH29772 ; CCH29772 ; BN6_24580 .
GeneIDi 14346898.
KEGGi sesp:BN6_24580.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae."
    Strobel T., Al-Dilaimi A., Blom J., Gessner A., Kalinowski J., Luzhetska M., Puhler A., Szczepanowski R., Bechthold A., Ruckert C.
    BMC Genomics 13:465-465(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764Imported.

Entry informationi

Entry nameiK0JWB5_SACES
AccessioniPrimary (citable) accession number: K0JWB5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 1, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3