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Protein
Submitted name:

Saccharothrix espanaensis DSM 44229 complete genome

Gene

BN6_11270

Organism
Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Saccharothrix espanaensis DSM 44229 complete genomeImported
Gene namesi
Ordered Locus Names:BN6_11270Imported
OrganismiSaccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)Imported
Taxonomic identifieri1179773 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharothrix
ProteomesiUP000006281 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.120.200. 3 hits.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SMARTiSM00282. LamG. 3 hits.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 3 hits.
SSF50939. SSF50939. 1 hit.
PROSITEiPS50025. LAM_G_DOMAIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0JW90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLVTVLAL LLAGSSVAAA SGVAPSTSSI GVEHVLFKSG TGGYGCYRIP
60 70 80 90 100
ALVRTASGAL LAFAEGRRSP SCADRGDIDL VVRRSTNDGR TWSPTRVVLR
110 120 130 140 150
GFGDNPFAPY TRGNPAPVVD AQTGRVFLLS TSNPAVPGGE RLPWVQHSDD
160 170 180 190 200
DGLTWSTSRQ IPASFAGSTR GWFATGPSHG VQLRNGNLVV GAHQGVDGHV
210 220 230 240 250
YAGVLYSTDH GDTWHASTTP DSLVEGKLNP GEMSVAELPN GDVYVAGRNH
260 270 280 290 300
IATGHHRTRA ISKDGGASVS ASTAIPTLTT PDVQGSVLAL RSGTLLFAGP
310 320 330 340 350
SDPQDRKLMR IRHSTDNGVT WTAGGLVNGS RAGYSDLAEL TTGEIGLLYE
360 370 380 390 400
GGEKFSADEI RFTRFTTQQA QVPGGTNPAG PATPAPGPTS PDVSPEANDA
410 420 430 440 450
YVRGSVGGGL VGQADLPWTR SLDVGADDFT VSFSFKHNGS TADQALFWAY
460 470 480 490 500
GQGGSVPQVW LRVAKSGQVV AWVQGSGGGA TTSVPGAFAD GAWHQLTLTR
510 520 530 540 550
QAGQVTLAVD AASTSATGVA GVVGQVGGRT GIRLGARLDG ADPFTGTLKD
560 570 580 590 600
FTLTRAGRVV ADLPLVTVDG AATATRTTVA ITDDLTGHCA DGTLLGGHRV
610 620 630 640 650
PVAGKFGSAL DVDSTHPGAE VPYLAALDPG GRDFTYSLWF QHKGGADQAL
660 670 680 690 700
LWAYGATAGK PSVWVRAQPG SDRLYGWVQT DVGQVAVQVK DGTDAAAFGD
710 720 730 740 750
GKWHQLVLRR VGDRVELSVD GGAPAVATGL TGSVGGPLGV RVGSKPDGSD
760 770 780 790 800
VLDGVLDDVK LDIAGVPVLR WGFDGQNTQA HDVVRVPAGP GTPDGSQRCN
810 820 830 840 850
HAAVRGGAAT TAGAVGRGLA FDGVDDSVVV PYEPVDGADF AVSTSFKYSG
860 870 880 890 900
GGDQVLVWAY GVGATERALW LRAQPSKDRL LAWVQTDAGA FGVAAEDPSA
910 920 930 940 950
VAAFGDGKWH RAELRRTGDR LELSVDGVVS GRAEIRGSLN YSDGFAVDGF
960 970 980 990
QLGARPDGAD RFKGALDEFR VERGGATLVH LPFEVVSGRE YVRG
Length:994
Mass (Da):102,742
Last modified:November 28, 2012 - v1
Checksum:i02F1FC60ACF0752A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE804045 Genomic DNA. Translation: CCH28453.1.
RefSeqiYP_007035326.1. NC_019673.1.

Genome annotation databases

EnsemblBacteriaiCCH28453; CCH28453; BN6_11270.
KEGGisesp:BN6_11270.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE804045 Genomic DNA. Translation: CCH28453.1.
RefSeqiYP_007035326.1. NC_019673.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCH28453; CCH28453; BN6_11270.
KEGGisesp:BN6_11270.

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.120.200. 3 hits.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SMARTiSM00282. LamG. 3 hits.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 3 hits.
SSF50939. SSF50939. 1 hit.
PROSITEiPS50025. LAM_G_DOMAIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae."
    Strobel T., Al-Dilaimi A., Blom J., Gessner A., Kalinowski J., Luzhetska M., Puhler A., Szczepanowski R., Bechthold A., Ruckert C.
    BMC Genomics 13:465-465(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764Imported.

Entry informationi

Entry nameiK0JW90_SACES
AccessioniPrimary (citable) accession number: K0JW90
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 29, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.