Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AP endonuclease

Gene

WESB_0265

Organism
Brachyspira pilosicoli WesB
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. endonuclease activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, Nuclease

Names & Taxonomyi

Protein namesi
Submitted name:
AP endonucleaseImported
Gene namesi
ORF Names:WESB_0265Imported
OrganismiBrachyspira pilosicoli WesBImported
Taxonomic identifieri1161918 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira
ProteomesiUP000003759 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliK0JG80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.

Sequencei

Sequence statusi: Complete.

K0JG80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFAGRINSL KGKMQDLSIA IEKLKKIKGI THIDLNYPEH FSNNDISEIK
60 70 80 90 100
KSMGGLKLNG ISTRFKEEFI HGEFINKDKK IRQNAIDLCK RAIDICQELD
110 120 130 140 150
GEYLTIWCAY DGFDYPFQID YERSWNNTIS ALQEISDYSK KVKISFEYKP
160 170 180 190 200
YEPRAFSLLD SIGHVLTAIS DTKRDNIGVT LDFCHMIMKK ENPAYSLALA
210 220 230 240 250
AMRNKLYGLH MNDGYGSIDN GLIFGSISLS QALEFVYYLI KYKYDGVVFF
260 270 280 290 300
DSFPVREDAS KEIESNINIF NKMVEIINSL GEKHIEEMIS HQDAIEVSNM

LIKILK
Length:306
Mass (Da):35,155
Last modified:November 27, 2012 - v1
Checksum:i0EE0E0C2BE0C4958
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE793032 Genomic DNA. Translation: CCG55737.1.
RefSeqiYP_006702825.1. NC_018604.1.

Genome annotation databases

EnsemblBacteriaiCCG55737; CCG55737; WESB_0265.
KEGGibpw:WESB_0265.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE793032 Genomic DNA. Translation: CCG55737.1.
RefSeqiYP_006702825.1. NC_018604.1.

3D structure databases

ProteinModelPortaliK0JG80.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCG55737; CCG55737; WESB_0265.
KEGGibpw:WESB_0265.

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of Brachyspira pilosicoli strains: genome rearrangements, reductions and correlation of genetic compliment with phenotypic diversity."
    Mappley L.J., Black M.L., Abuoun M., Darby A.C., Woodward M.J., Parkhill J., Turner A.K., Bellgard M.I., La T., Phillips N.D., La Ragione R.M., Hampson D.J.
    BMC Genomics 13:454-454(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WesBImported.

Entry informationi

Entry nameiK0JG80_BRAPL
AccessioniPrimary (citable) accession number: K0JG80
Entry historyi
Integrated into UniProtKB/TrEMBL: November 27, 2012
Last sequence update: November 27, 2012
Last modified: March 31, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.