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K0INI6

- K0INI6_NITGG

UniProt

K0INI6 - K0INI6_NITGG

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Protein
Submitted name:

Isocitrate/isopropylmalate dehydrogenase

Gene

icd

Organism
Nitrososphaera gargensis (strain Ga9.2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. isocitrate dehydrogenase (NAD+) activity Source: UniProtKB-EC
  2. magnesium ion binding Source: InterPro
  3. NAD binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate/isopropylmalate dehydrogenaseImported (EC:1.1.1.-Imported, EC:1.1.1.41Imported)
Gene namesi
Name:icdImported
Ordered Locus Names:Ngar_c25160Imported
OrganismiNitrososphaera gargensis (strain Ga9.2)Imported
Taxonomic identifieri1237085 [NCBI]
Taxonomic lineageiArchaeaThaumarchaeotaNitrososphaeralesNitrososphaeraceaeNitrososphaera
ProteomesiUP000008037: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

KOiK00031.
OMAiTNLFMDV.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0INI6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MASTKTAAVI RGDGTGPELV NAMIKVLKAC NSKVELVPCD AGSEWWEKNG
60 70 80 90 100
GTSYISPEVW KLLEESDACF KGPTTTVPVP NAPRSVAVSI RQKFELYANI
110 120 130 140 150
RPIKTYKNAE KQLDFVCVRE ATEGLYAGIE FKTSDDSAVA IRKTTRKGCD
160 170 180 190 200
RVAKAGFEVA KKRGFGKVYA ITKRNILKET DGIFWAAVEN AQKQFKNIQV
210 220 230 240 250
EEYYIDNMTQ QLVKNPERFN QSVLLSTNLF MDIVSECASG HVGSIGNVYS
260 270 280 290 300
GNYGDKYAMF EPAHGSAPKY AGQNKVNPVA TVLSGAWMVE YLGEKHISDA
310 320 330 340
IFKATEDVIN EGKYVTYDLG GSATLSQMAD QIAARAGKLL KK
Length:342
Mass (Da):37,503
Last modified:November 28, 2012 - v1
Checksum:iAEF1A53C54FEAEDB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002408 Genomic DNA. Translation: AFU59439.1.
RefSeqiYP_006863096.1. NC_018719.1.

Genome annotation databases

EnsemblBacteriaiAFU59439; AFU59439; Ngar_c25160.
GeneIDi13794534.
KEGGinga:Ngar_c25160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002408 Genomic DNA. Translation: AFU59439.1 .
RefSeqi YP_006863096.1. NC_018719.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFU59439 ; AFU59439 ; Ngar_c25160 .
GeneIDi 13794534.
KEGGi nga:Ngar_c25160.

Phylogenomic databases

KOi K00031.
OMAi TNLFMDV.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11835. PTHR11835. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations."
    Spang A., Poehlein A., Offre P., Zumbragel S., Haider S., Rychlik N., Nowka B., Schmeisser C., Lebedeva E.V., Rattei T., Bohm C., Schmid M., Galushko A., Hatzenpichler R., Weinmaier T., Daniel R., Schleper C., Spieck E., Streit W., Wagner M.
    Environ. Microbiol. 14:3122-3145(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ga9.2Imported.

Entry informationi

Entry nameiK0INI6_NITGG
AccessioniPrimary (citable) accession number: K0INI6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 29, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3