K0INI6 (K0INI6_NITGG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isocitrate/isopropylmalate dehydrogenase EMBL AFU59439.1
EC=1.1.1.- EMBL AFU59439.1
EC=1.1.1.41 EMBL AFU59439.1

Gene names

Name:	icd EMBL AFU59439.1
Ordered Locus Names:	Ngar_c25160 EMBL AFU59439.1

Organism

Nitrososphaera gargensis (strain Ga9.2) [Complete proteome] [HAMAP] EMBL AFU59439.1

Taxonomic identifier

1237085 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Thaumarchaeota › Nitrososphaerales › Nitrososphaeraceae › Nitrososphaera › Candidatus Nitrososphaera gargensis

Protein attributes

Sequence length	342 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL AFU59439.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NAD+) activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	K0INI6 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: AEF1A53C54FEAEDB	FASTA	342	37,503
	10 20 30 40 50 60 MASTKTAAVI RGDGTGPELV NAMIKVLKAC NSKVELVPCD AGSEWWEKNG GTSYISPEVW 70 80 90 100 110 120 KLLEESDACF KGPTTTVPVP NAPRSVAVSI RQKFELYANI RPIKTYKNAE KQLDFVCVRE 130 140 150 160 170 180 ATEGLYAGIE FKTSDDSAVA IRKTTRKGCD RVAKAGFEVA KKRGFGKVYA ITKRNILKET 190 200 210 220 230 240 DGIFWAAVEN AQKQFKNIQV EEYYIDNMTQ QLVKNPERFN QSVLLSTNLF MDIVSECASG 250 260 270 280 290 300 HVGSIGNVYS GNYGDKYAMF EPAHGSAPKY AGQNKVNPVA TVLSGAWMVE YLGEKHISDA 310 320 330 340 IFKATEDVIN EGKYVTYDLG GSATLSQMAD QIAARAGKLL KK

References

[1]

"The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations." Spang A., Poehlein A., Offre P., Zumbragel S., Haider S., Rychlik N., Nowka B., Schmeisser C., Lebedeva E.V., Rattei T., Bohm C., Schmid M., Galushko A., Hatzenpichler R., Weinmaier T., Daniel R., Schleper C., Spieck E., Streit W., Wagner M. Environ. Microbiol. 0:0-0(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ga9.2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002408 Genomic DNA. Translation: AFU59439.1.
RefSeq	YP_006863096.1. NC_018719.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFU59439; AFU59439; Ngar_c25160.
GeneID	13794534.
KEGG	nga:Ngar_c25160.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00031.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR001804. Isocitrate/isopropylmalate_DH. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

K0INI6_NITGG

Accession

Primary (citable) accession number: K0INI6

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	April 3, 2013
This is version 4 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)