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K0INI6

- K0INI6_NITGG

UniProt

K0INI6 - K0INI6_NITGG

Protein
Submitted name:

Isocitrate/isopropylmalate dehydrogenase

Gene

icd

Organism
Nitrososphaera gargensis (strain Ga9.2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NAD+) activity Source: UniProtKB-EC
    2. magnesium ion binding Source: InterPro
    3. NAD binding Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Isocitrate/isopropylmalate dehydrogenaseImported (EC:1.1.1.-Imported, EC:1.1.1.41Imported)
    Gene namesi
    Name:icdImported
    Ordered Locus Names:Ngar_c25160Imported
    OrganismiNitrososphaera gargensis (strain Ga9.2)Imported
    Taxonomic identifieri1237085 [NCBI]
    Taxonomic lineageiArchaeaThaumarchaeotaNitrososphaeralesNitrososphaeraceaeNitrososphaera
    ProteomesiUP000008037: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

    Phylogenomic databases

    KOiK00031.
    OMAiTNLFMDV.

    Family and domain databases

    Gene3Di3.40.718.10. 1 hit.
    InterProiIPR001804. Isocitrate/isopropylmalate_DH.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PANTHERiPTHR11835. PTHR11835. 1 hit.
    PfamiPF00180. Iso_dh. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0INI6-1 [UniParc]FASTAAdd to Basket

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    MASTKTAAVI RGDGTGPELV NAMIKVLKAC NSKVELVPCD AGSEWWEKNG    50
    GTSYISPEVW KLLEESDACF KGPTTTVPVP NAPRSVAVSI RQKFELYANI 100
    RPIKTYKNAE KQLDFVCVRE ATEGLYAGIE FKTSDDSAVA IRKTTRKGCD 150
    RVAKAGFEVA KKRGFGKVYA ITKRNILKET DGIFWAAVEN AQKQFKNIQV 200
    EEYYIDNMTQ QLVKNPERFN QSVLLSTNLF MDIVSECASG HVGSIGNVYS 250
    GNYGDKYAMF EPAHGSAPKY AGQNKVNPVA TVLSGAWMVE YLGEKHISDA 300
    IFKATEDVIN EGKYVTYDLG GSATLSQMAD QIAARAGKLL KK 342
    Length:342
    Mass (Da):37,503
    Last modified:November 28, 2012 - v1
    Checksum:iAEF1A53C54FEAEDB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002408 Genomic DNA. Translation: AFU59439.1.
    RefSeqiWP_015019974.1. NC_018719.1.
    YP_006863096.1. NC_018719.1.

    Genome annotation databases

    EnsemblBacteriaiAFU59439; AFU59439; Ngar_c25160.
    GeneIDi13794534.
    KEGGinga:Ngar_c25160.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002408 Genomic DNA. Translation: AFU59439.1 .
    RefSeqi WP_015019974.1. NC_018719.1.
    YP_006863096.1. NC_018719.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFU59439 ; AFU59439 ; Ngar_c25160 .
    GeneIDi 13794534.
    KEGGi nga:Ngar_c25160.

    Phylogenomic databases

    KOi K00031.
    OMAi TNLFMDV.

    Family and domain databases

    Gene3Di 3.40.718.10. 1 hit.
    InterProi IPR001804. Isocitrate/isopropylmalate_DH.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    PANTHERi PTHR11835. PTHR11835. 1 hit.
    Pfami PF00180. Iso_dh. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations."
      Spang A., Poehlein A., Offre P., Zumbragel S., Haider S., Rychlik N., Nowka B., Schmeisser C., Lebedeva E.V., Rattei T., Bohm C., Schmid M., Galushko A., Hatzenpichler R., Weinmaier T., Daniel R., Schleper C., Spieck E., Streit W., Wagner M.
      Environ. Microbiol. 14:3122-3145(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ga9.2Imported.

    Entry informationi

    Entry nameiK0INI6_NITGG
    AccessioniPrimary (citable) accession number: K0INI6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3