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K0I2P5

- K0I2P5_9BURK

UniProt

K0I2P5 - K0I2P5_9BURK

Protein
Submitted name:

DNA ligase

Gene

C380_14890

Organism
Acidovorax sp. KKS102
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:C380_14890Imported
    OrganismiAcidovorax sp. KKS102Imported
    Taxonomic identifieri358220 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax
    ProteomesiUP000006306: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    K0I2P5-1 [UniParc]FASTAAdd to Basket

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    MLRRHCLAWL GLAPLAALTT PQAWAADAPA LLLANVYRPG MRLADYWVSE    50
    KYDGVRGYWD GHTLRTRGGE TVTAPAWFTA GWPDTPMDGE LWAGRGRFSH 100
    AQSTVRQQQP DDAAWREMRF MVFDLPAHGG TFDQRLPELN KLVESLDQPW 150
    VQAVPQQRVA SDAALQKLLL RTVRAGGEGL MLHRGASMYR AGRSDDLIKV 200
    KTHEDAEAKV VAHLPGQGRH AGRLGALVVE MPSGQRFRLG AGLTDAERDH 250
    PPPVGSWVTY RFRGTHDSGV PRFASFVRVR DDMPPTR 287
    Length:287
    Mass (Da):31,918
    Last modified:November 28, 2012 - v1
    Checksum:iCC87F811512A9CC2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003872 Genomic DNA. Translation: AFU46675.1.
    RefSeqiWP_015014681.1. NC_018708.1.
    YP_006855313.1. NC_018708.1.

    Genome annotation databases

    EnsemblBacteriaiAFU46675; AFU46675; C380_14890.
    GeneIDi13786503.
    KEGGiack:C380_14890.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003872 Genomic DNA. Translation: AFU46675.1 .
    RefSeqi WP_015014681.1. NC_018708.1.
    YP_006855313.1. NC_018708.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFU46675 ; AFU46675 ; C380_14890 .
    GeneIDi 13786503.
    KEGGi ack:C380_14890.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Acidovorax sp. Strain KKS102, a Polychlorinated-Biphenyl Degrader."
      Ohtsubo Y., Maruyama F., Mitsui H., Nagata Y., Tsuda M.
      J. Bacteriol. 194:6970-6971(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KKS102Imported.

    Entry informationi

    Entry nameiK0I2P5_9BURK
    AccessioniPrimary (citable) accession number: K0I2P5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3