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K0I2P5 (K0I2P5_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL AFU46675.1
Gene names
ORF Names:C380_14890 EMBL AFU46675.1
OrganismAcidovorax sp. KKS102 [Complete proteome] EMBL AFU46675.1
Taxonomic identifier358220 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAcidovorax

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFU46675.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K0I2P5 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: CC87F811512A9CC2

FASTA28731,918
        10         20         30         40         50         60 
MLRRHCLAWL GLAPLAALTT PQAWAADAPA LLLANVYRPG MRLADYWVSE KYDGVRGYWD 

        70         80         90        100        110        120 
GHTLRTRGGE TVTAPAWFTA GWPDTPMDGE LWAGRGRFSH AQSTVRQQQP DDAAWREMRF 

       130        140        150        160        170        180 
MVFDLPAHGG TFDQRLPELN KLVESLDQPW VQAVPQQRVA SDAALQKLLL RTVRAGGEGL 

       190        200        210        220        230        240 
MLHRGASMYR AGRSDDLIKV KTHEDAEAKV VAHLPGQGRH AGRLGALVVE MPSGQRFRLG 

       250        260        270        280 
AGLTDAERDH PPPVGSWVTY RFRGTHDSGV PRFASFVRVR DDMPPTR 

« Hide

References

[1]"Complete Genome Sequence of Acidovorax sp. Strain KKS102, a Polychlorinated-Biphenyl Degrader."
Ohtsubo Y., Maruyama F., Mitsui H., Nagata Y., Tsuda M.
J. Bacteriol. 194:6970-6971(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KKS102 EMBL AFU46675.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003872 Genomic DNA. Translation: AFU46675.1.
RefSeqYP_006855313.1. NC_018708.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFU46675; AFU46675; C380_14890.
GeneID13786503.
KEGGack:C380_14890.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK0I2P5_9BURK
AccessionPrimary (citable) accession number: K0I2P5
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: June 11, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)