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Protein
Submitted name:

DNA ligase

Gene

A911_08040

Organism
Campylobacter jejuni subsp. jejuni PT14
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:A911_08040Imported
OrganismiCampylobacter jejuni subsp. jejuni PT14Imported
Taxonomic identifieri1201032 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000006307: Chromosome

Structurei

3D structure databases

ProteinModelPortaliK0HV39.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0HV39-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRFVFLICCA CLVFANEILL LSKFDKQDFN SKDFNAYLMS EKLDGVRGIW
60 70 80 90 100
DGKYLKTRQN YKIKTPDFFT KNFPPFAIDG ELWIARNKFD EISALIRSGD
110 120 130 140 150
SNLTLWKEVT YNIFDVPNAC EEFQISTCTL KNRLAVLEEY LQKYPSAYIK
160 170 180 190 200
IISQIPVENQ NNLNQFYESI IKNQGEGIVI RKNLSPYEKG RSKNATKLKP
210 220 230 240 250
YDDAECELVG FRKGKGKFEN QVGALLCKMP NGQIIKIGSG LKDEDRKNPP
260 270 280
KIGSIVTYKF NGLTKNSLPR FPVFLRIRDE NP
Length:282
Mass (Da):32,463
Last modified:November 28, 2012 - v1
Checksum:i305F01623AB5BF76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003871 Genomic DNA. Translation: AFU43670.1.
RefSeqiYP_006858650.1. NC_018709.2.

Genome annotation databases

EnsemblBacteriaiAFU43670; AFU43670; A911_08040.
GeneIDi13791444.
KEGGicjp:A911_08040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003871 Genomic DNA. Translation: AFU43670.1.
RefSeqiYP_006858650.1. NC_018709.2.

3D structure databases

ProteinModelPortaliK0HV39.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFU43670; AFU43670; A911_08040.
GeneIDi13791444.
KEGGicjp:A911_08040.

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Universal Bacteriophage Host Strain Campylobacter jejuni subsp. jejuni PT14."
    Brathwaite K.J., Siringan P., Moreton J., Wilson R., Connerton I.F.
    Genome Announc. 1:e00969-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PT14Imported.

Entry informationi

Entry nameiK0HV39_CAMJU
AccessioniPrimary (citable) accession number: K0HV39
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: January 7, 2015
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.