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Protein
Submitted name:

DNA ligase

Gene

ASU2_10920

Organism
Actinobacillus suis H91-0380
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:ASU2_10920Imported
OrganismiActinobacillus suis H91-0380Imported
Taxonomic identifieri696748 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus
ProteomesiUP000006303 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0G071-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLGQYRDQD INGWVMSEKL DGVRGYWDGK QLISRQGNPL APPDYFIKDF
60 70 80 90 100
PPFAIDGELF SERGKFEEIS SITRASEPKG WYKLKFYIFD VPNAQGNLFE
110 120 130 140 150
RLAKLKNYLL QHPTPYIQII EQIPIQNKAH LMQFYQQVLA QHGEGVVVRN
160 170 180 190 200
PNTAYIKGRS AQILKLKPVL DEECTVIAHH NGKGKYRDKL GAITCENQRG
210 220 230 240 250
RFRIGSGFKD KDRANPPPIG SLITYKYRGL TKQGKPRFAT FFRMRTDIGS

IHVVTE
Length:256
Mass (Da):29,378
Last modified:November 28, 2012 - v1
Checksum:iBC1740E3942F2658
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003875 Genomic DNA. Translation: AFU20312.1.
RefSeqiYP_006818551.1. NC_018690.1.

Genome annotation databases

EnsemblBacteriaiAFU20312; AFU20312; ASU2_10920.
KEGGiasi:ASU2_10920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003875 Genomic DNA. Translation: AFU20312.1.
RefSeqiYP_006818551.1. NC_018690.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFU20312; AFU20312; ASU2_10920.
KEGGiasi:ASU2_10920.

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Actinobacillus suis H91-0380, a Virulent Serotype O2 Strain."
    Macinnes J.I., Mackinnon J., Bujold A.R., Ziebell K., Kropinski A.M., Nash J.H.
    J. Bacteriol. 194:6686-6687(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H91-0380Imported.

Entry informationi

Entry nameiK0G071_ACTSU
AccessioniPrimary (citable) accession number: K0G071
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 29, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.