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K0EXY8

- K0EXY8_9NOCA

UniProt

K0EXY8 - K0EXY8_9NOCA

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligC

Organism
Nocardia brasiliensis ATCC 700358
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligCImported
    ORF Names:O3I_019825Imported
    OrganismiNocardia brasiliensis ATCC 700358Imported
    Taxonomic identifieri1133849 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia
    ProteomesiUP000006304: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliK0EXY8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0EXY8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLAKTAPGVP REPGLSYEPK WDGFRCIVFR DGAEVELGSR NDRPLTRYFP    50
    EVAELLRQAL PDRCVVDGEI VVVTDQGLDF DTLQNRLHPA ASRVNKLAVE 100
    TPASFVAFDL LALGDRDLTE EPFAERRRLL ETILDTKPAR VHLTPITQDP 150
    DVAEDWFTRF EGAGFDGVMV KADGLAYLQD KRVMLKVKHE RTADCVVAGF 200
    RWHKDGEGVG SLLLGLFDDE GNLHHVGVAS SFTAARRKEL VGELAPLREN 250
    ALENHPWREW ADAAAQARAD GKMPGGVSRW TGGKDLSWEA LRTELVAEVR 300
    YEHVQSGRLR HGGRLVRFRT DRTPESCTYA QLDEAPPAEL SEIFSEAKS 349
    Length:349
    Mass (Da):38,938
    Last modified:November 28, 2012 - v1
    Checksum:iA102DB9B88369451
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003876 Genomic DNA. Translation: AFU01924.1.
    RefSeqiYP_006808898.1. NC_018681.1.

    Genome annotation databases

    EnsemblBacteriaiAFU01924; AFU01924; O3I_019825.
    GeneIDi13726992.
    KEGGinbr:O3I_019825.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003876 Genomic DNA. Translation: AFU01924.1 .
    RefSeqi YP_006808898.1. NC_018681.1.

    3D structure databases

    ProteinModelPortali K0EXY8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFU01924 ; AFU01924 ; O3I_019825 .
    GeneIDi 13726992.
    KEGGi nbr:O3I_019825.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HUJEG-1Imported.

    Entry informationi

    Entry nameiK0EXY8_9NOCA
    AccessioniPrimary (citable) accession number: K0EXY8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3