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K0EXY8

- K0EXY8_9NOCA

UniProt

K0EXY8 - K0EXY8_9NOCA

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligC

Organism
Nocardia brasiliensis ATCC 700358
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligCImported
ORF Names:O3I_019825Imported
OrganismiNocardia brasiliensis ATCC 700358Imported
Taxonomic identifieri1133849 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia
ProteomesiUP000006304: Chromosome

Structurei

3D structure databases

ProteinModelPortaliK0EXY8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K0EXY8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MLAKTAPGVP REPGLSYEPK WDGFRCIVFR DGAEVELGSR NDRPLTRYFP
60 70 80 90 100
EVAELLRQAL PDRCVVDGEI VVVTDQGLDF DTLQNRLHPA ASRVNKLAVE
110 120 130 140 150
TPASFVAFDL LALGDRDLTE EPFAERRRLL ETILDTKPAR VHLTPITQDP
160 170 180 190 200
DVAEDWFTRF EGAGFDGVMV KADGLAYLQD KRVMLKVKHE RTADCVVAGF
210 220 230 240 250
RWHKDGEGVG SLLLGLFDDE GNLHHVGVAS SFTAARRKEL VGELAPLREN
260 270 280 290 300
ALENHPWREW ADAAAQARAD GKMPGGVSRW TGGKDLSWEA LRTELVAEVR
310 320 330 340
YEHVQSGRLR HGGRLVRFRT DRTPESCTYA QLDEAPPAEL SEIFSEAKS
Length:349
Mass (Da):38,938
Last modified:November 28, 2012 - v1
Checksum:iA102DB9B88369451
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003876 Genomic DNA. Translation: AFU01924.1.
RefSeqiYP_006808898.1. NC_018681.1.

Genome annotation databases

EnsemblBacteriaiAFU01924; AFU01924; O3I_019825.
GeneIDi13726992.
KEGGinbr:O3I_019825.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003876 Genomic DNA. Translation: AFU01924.1 .
RefSeqi YP_006808898.1. NC_018681.1.

3D structure databases

ProteinModelPortali K0EXY8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFU01924 ; AFU01924 ; O3I_019825 .
GeneIDi 13726992.
KEGGi nbr:O3I_019825.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HUJEG-1Imported.

Entry informationi

Entry nameiK0EXY8_9NOCA
AccessioniPrimary (citable) accession number: K0EXY8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 1, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3