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K0EH34 (K0EH34_9NOCA) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:O3I_003125 EMBL AFT98587.1
OrganismNocardia brasiliensis ATCC 700358 [Complete proteome] EMBL AFT98587.1
Taxonomic identifier1133849 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
K0EH34 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 9744C34C4B07D8F7

FASTA46751,645
        10         20         30         40         50         60 
MSETPDSDDL FALPGINRIA PRGGFPQHEL LPQVAYEIVH DELLLDGVSR MNLATFCTTW 

        70         80         90        100        110        120 
SDDTARRLMA ESLDKNIVDK DEYPQTAELE RRCVRMIADL WHCPDPAGTH GTSTTGSSEA 

       130        140        150        160        170        180 
AMLGGLAAKF RWRQRGGTGT PNFVCGPVQV CWEKFARYFD VEIRQVPLSG DRLTLHPDEV 

       190        200        210        220        230        240 
AAHCDERTIM VVPTFGQTFT GLYEDVAGIS RALDRVQEVS GLDIPIHVDA ASGGFLAPFT 

       250        260        270        280        290        300 
APDLVWDFRL PRVKSINASG HKTGLAPLGA GWAIWREAAD LPAELIFDVD YLGGSVGTFN 

       310        320        330        340        350        360 
LNFSRPGGQA ITQYYEFIRL GRIGYTRVQS ASYRAARKLA AGLREFGIFE PIHDGDPRHG 

       370        380        390        400        410        420 
ITAVSWRLTG DPGFNLYDLS DRLRSRGWLI AAYPLPAHRE NEIIMRAVIR HGFTVDMADL 

       430        440        450        460 
LLADFDRCVK QLARHPFSTS LTRQEAGGFT HSATAQVPDP KRDTHPA 

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References

[1]"Complete genome sequence of Nocardia brasiliensis HUJEG-1."
Vera-Cabrera L., Ortiz-Lopez R., Elizondo-Gonzalez R., Perez-Maya A.A., Ocampo-Candiani J.
J. Bacteriol. 194:2761-2762(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HUJEG-1 EMBL AFT98587.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003876 Genomic DNA. Translation: AFT98587.1.
RefSeqYP_006805562.1. NC_018681.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFT98587; AFT98587; O3I_003125.
GeneID13733698.
KEGGnbr:O3I_003125.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK0EH34_9NOCA
AccessionPrimary (citable) accession number: K0EH34
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: January 22, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)