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K0EC25

- K0EC25_ALTMB

UniProt

K0EC25 - K0EC25_ALTMB

Protein
Submitted name:

DNA ligase

Gene

AMBAS45_03390

Organism
Alteromonas macleodii (strain Balearic Sea AD45)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:AMBAS45_03390Imported
    OrganismiAlteromonas macleodii (strain Balearic Sea AD45)Imported
    Taxonomic identifieri1004787 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000006308: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0EC25-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNFLTAVYV LSITAIANVN ANYMLDTVEG LQLAKQYDQS RTDINVADYW    50
    VSEKLDGIRA RWNGTELFTR NGNKIFAPTW FTANWPETTI DGELWIGRGE 100
    FERTASIVLS TMTNIELHSV ANASSSTVSS ADTIAAANSL SAKRWAKVRF 150
    MAFDMPMMGE PFGRRLNMLN SLSKSTPNPT FAVIPQFKLT SIVSLDEKLE 200
    QVTQEGGEGL MLHHEQALYT SGRSDKLLKV KRFEDAEGKV LALLPGKGRF 250
    KGMMGSLLVE TREGIQFKLG TGFSENERQS PPAIGSWVTF KYYGLTKNGK 300
    PKFASYLRTR PQTDLPN 317
    Length:317
    Mass (Da):35,373
    Last modified:November 28, 2012 - v1
    Checksum:iDD27E1C65C5A6F00
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003873 Genomic DNA. Translation: AFT94158.1.
    RefSeqiYP_006801639.1. NC_018679.1.

    Genome annotation databases

    EnsemblBacteriaiAFT94158; AFT94158; AMBAS45_03390.
    GeneIDi13746960.
    KEGGiamb:AMBAS45_03390.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003873 Genomic DNA. Translation: AFT94158.1 .
    RefSeqi YP_006801639.1. NC_018679.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFT94158 ; AFT94158 ; AMBAS45_03390 .
    GeneIDi 13746960.
    KEGGi amb:AMBAS45_03390.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph."
      Lopez-Perez M., Gonzaga A., Martin-Cuadrado A.B., Onyshchenko O., Ghavidel A., Ghai R., Rodriguez-Valera F.
      Sci. Rep. 2:696-696(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Balearic Sea AD45Imported.

    Entry informationi

    Entry nameiK0EC25_ALTMB
    AccessioniPrimary (citable) accession number: K0EC25
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3