K0DU22 (K0DU22_9BURK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL AFT88192.1

Gene names

ORF Names:

BUPH_00733 EMBL AFT88192.1

Organism

Burkholderia phenoliruptrix BR3459a EMBL AFT88192.1

Taxonomic identifier

1229205 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia phenoliruptrix

Protein attributes

Sequence length	429 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL AFT88192.1 Transferase
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	K0DU22 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: E66946D5FB765405	FASTA	429	46,016
	10 20 30 40 50 60 MNLKNADLKS RKDAATPRGV GVMCDFYAER AENAELWDVE GRRFIDFAAG IAVCNTGHRH 70 80 90 100 110 120 PKIVAALRDQ LDHFTHTAYQ IVPYASYVEL AEKLNQRAPG DHPKKTAFFT TGAEAVENAI 130 140 150 160 170 180 KIARAATGRP GVIAFTGGFH GRTLMGMALT GKVAPYKLGF GPFPSDVFHA PFPNPLHGVS 190 200 210 220 230 240 TADSLKAIEF LFKADIDPKR VAAIIFEPVQ GEGGFYPAPV EFVRALRKLC NEHGILLIAD 250 260 270 280 290 300 EVQTGFARTG KLFAMHHYDV VPDLMTVAKS LAGGMPLSGV IGRAEVMDAA APGGLGGTYA 310 320 330 340 350 360 GNPLALAAAH AVLDIIDEEK LCERAVVLGE RVKTKLIALQ KDAPQIADVR GPGAMVAVEF 370 380 390 400 410 420 CKPGSTEPDA DFTKRVQARA LERGLLLLVC GVYSNVVRFL FPLTIQDTVF DEALAILEDV IKDSVAVAA

References

[1]

"Complete Genome Sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a Heat-Tolerant, Nitrogen-Fixing Symbiont of Mimosa flocculosa." de Oliveira Cunha C., Goda Zuleta L.F., Paula de Almeida L.G., Prioli Ciapina L., Lustrino Borges W., Pitard R.M., Baldani J.I., Straliotto R., de Faria S.M., Hungria M., Sousa Cavada B., Mercante F.M., Ribeiro de Vasconcelos A.T. J. Bacteriol. 194:6675-6676(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BR3459a EMBL AFT88192.1.

[2]

Cunha C.O., Zuleta L.F.G., Almeida L.G.P., Ciapina L.P., Borges W.L., Pitard R.M., Baldani J.I., Rosangela S.R., Faria S.M., Hungria M., Cavada B.S., Mercante F.M., Vasconcelos A.T.R. Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BR3459a EMBL AFT88192.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003864 Genomic DNA. Translation: AFT88192.1.
RefSeq	YP_006793175.1. NC_018672.1.
3D structure databases
ProteinModelPortal	K0DU22.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFT88192; AFT88192; BUPH_00733.
GeneID	13735487.
KEGG	bpx:BUPH_00733.
Phylogenomic databases
KO	K00823.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

K0DU22_9BURK

Accession

Primary (citable) accession number: K0DU22

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)