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K0DRQ9 (K0DRQ9_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BUPH_00179 EMBL AFT87650.1
OrganismBurkholderia phenoliruptrix BR3459a EMBL AFT87650.1
Taxonomic identifier1229205 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL AFT87650.1
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K0DRQ9 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 0019CFD98F86EEE4

FASTA55463,944
        10         20         30         40         50         60 
MLNDLWYKNA IVYCLSVGSF MDANGDGVGD FKGLLRRLDY LQGLGVTTIW LMPFQPSPGR 

        70         80         90        100        110        120 
DNGYDISDYY NVDPKYGTLG DFSEFTHACR ERGLRVMIDL VVNHTSDQHP WFREARSDPD 

       130        140        150        160        170        180 
SPYRDWYVWS DRQPPNAKDG VVFPGVQKST WTFDKEAKRW YFHRFYEFQP DLNTANPYVQ 

       190        200        210        220        230        240 
AELLKIMGFW IQLGVSGFRM DAVPFVIATK GPQVRKPVEQ YDMLRAFREF LQWRQGDAII 

       250        260        270        280        290        300 
LAEANVLPNT DLEYFGDEGE RLQMMFNFQL NQNTFYTLAT GDTAPLKKAL TATRPRPATA 

       310        320        330        340        350        360 
QWGVFLRNHD ELDLGRLTPE QRAAVFAAFA PDPDMQLYER GIRRRLAPML AGDRRRLELA 

       370        380        390        400        410        420 
YSLMLTLPGT PVFRYGDEIG MGDDLRLPER ECARTPMQWS AEPQGGFTKH PKPPCRVITG 

       430        440        450        460        470        480 
GAYGFERINV AGQRRDPNSL LNWMERMIRM RREVPEISWG DFHVLRASRD DVLALRYDWR 

       490        500        510        520        530        540 
NNSVLCLHNF GAEACTVKFR SGCAEPGQNR LINLLSDDHS EESDDGRHAV VLEPYGYRWY 

       550 
RVGGLDYLLR RSEI 

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References

[1]"Complete Genome Sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a Heat-Tolerant, Nitrogen-Fixing Symbiont of Mimosa flocculosa."
de Oliveira Cunha C., Goda Zuleta L.F., Paula de Almeida L.G., Prioli Ciapina L., Lustrino Borges W., Pitard R.M., Baldani J.I., Straliotto R., de Faria S.M., Hungria M., Sousa Cavada B., Mercante F.M., Ribeiro de Vasconcelos A.T.
J. Bacteriol. 194:6675-6676(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BR3459a EMBL AFT87650.1.
[2]Cunha C.O., Zuleta L.F.G., Almeida L.G.P., Ciapina L.P., Borges W.L., Pitard R.M., Baldani J.I., Rosangela S.R., Faria S.M., Hungria M., Cavada B.S., Mercante F.M., Vasconcelos A.T.R.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BR3459a EMBL AFT87650.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003864 Genomic DNA. Translation: AFT87650.1.
RefSeqYP_006792633.1. NC_018672.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFT87650; AFT87650; BUPH_00179.
GeneID13734942.
KEGGbpx:BUPH_00179.

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameK0DRQ9_9BURK
AccessionPrimary (citable) accession number: K0DRQ9
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)