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K0CL63 (K0CL63_ALTME) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length317 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFT73368.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K0CL63 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 2D61E420BA4113FE

FASTA31735,313
        10         20         30         40         50         60 
MRNFLTAVYV LSITAIANVN ANHMLDTVEG LQLAKQYDQS RTDINVADYW VSEKLDGIRA 

        70         80         90        100        110        120 
RWNGTELLTR NGNKIFAPTW FTANWPETTI DGELWIGRGE FERTASIVLS TMTNIELHSV 

       130        140        150        160        170        180 
ANASSSTVSS ADTIAAANSL SAKRWAKVRF MAFDMPMMGE PFGRRLNRLN SLSKSTPNPT 

       190        200        210        220        230        240 
FAVIPQFKLT SIASLDEKLE QVTQEGGEGL MLHHEQALYT SGRSDMLLKV KRFEDAEGKV 

       250        260        270        280        290        300 
LALLPGKGRF KGMMGSLLVE TREGIQFKLG TGFSENERQS PPAIGSWVTF KYYGLTKNGK 

       310 
PKFASYLRTR PQTDLPN 

« Hide

References

[1]"Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph."
Lopez-Perez M., Gonzaga A., Martin-Cuadrado A.B., Onyshchenko O., Ghavidel A., Ghai R., Rodriguez-Valera F.
Sci. Rep. 2:696-696(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: English Channel 673.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003844 Genomic DNA. Translation: AFT73368.1.
RefSeqYP_006797745.1. NC_018678.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFT73368; AFT73368; AMEC673_03345.
GeneID13741379.
KEGGamg:AMEC673_03345.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGKGQFEN.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0CL63_ALTME
AccessionPrimary (citable) accession number: K0CL63
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: June 11, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)