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K0CL63

- K0CL63_ALTME

UniProt

K0CL63 - K0CL63_ALTME

Protein
Submitted name:

DNA ligase

Gene

AMEC673_03345

Organism
Alteromonas macleodii (strain English Channel 673)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:AMEC673_03345Imported
    OrganismiAlteromonas macleodii (strain English Channel 673)Imported
    Taxonomic identifieri1004788 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000006296: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K0CL63-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNFLTAVYV LSITAIANVN ANHMLDTVEG LQLAKQYDQS RTDINVADYW    50
    VSEKLDGIRA RWNGTELLTR NGNKIFAPTW FTANWPETTI DGELWIGRGE 100
    FERTASIVLS TMTNIELHSV ANASSSTVSS ADTIAAANSL SAKRWAKVRF 150
    MAFDMPMMGE PFGRRLNRLN SLSKSTPNPT FAVIPQFKLT SIASLDEKLE 200
    QVTQEGGEGL MLHHEQALYT SGRSDMLLKV KRFEDAEGKV LALLPGKGRF 250
    KGMMGSLLVE TREGIQFKLG TGFSENERQS PPAIGSWVTF KYYGLTKNGK 300
    PKFASYLRTR PQTDLPN 317
    Length:317
    Mass (Da):35,313
    Last modified:November 28, 2012 - v1
    Checksum:i2D61E420BA4113FE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003844 Genomic DNA. Translation: AFT73368.1.
    RefSeqiYP_006797745.1. NC_018678.1.

    Genome annotation databases

    EnsemblBacteriaiAFT73368; AFT73368; AMEC673_03345.
    GeneIDi13741379.
    KEGGiamg:AMEC673_03345.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003844 Genomic DNA. Translation: AFT73368.1 .
    RefSeqi YP_006797745.1. NC_018678.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFT73368 ; AFT73368 ; AMEC673_03345 .
    GeneIDi 13741379.
    KEGGi amg:AMEC673_03345.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph."
      Lopez-Perez M., Gonzaga A., Martin-Cuadrado A.B., Onyshchenko O., Ghavidel A., Ghai R., Rodriguez-Valera F.
      Sci. Rep. 2:696-696(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: English Channel 673Imported.

    Entry informationi

    Entry nameiK0CL63_ALTME
    AccessioniPrimary (citable) accession number: K0CL63
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3