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K0C4Y6 (K0C4Y6_CYCSP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Q91_1570 EMBL AFT67605.1
OrganismCycloclasticus sp. (strain P1) [Complete proteome] [HAMAP] EMBL AFT67605.1
Taxonomic identifier385025 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeCycloclasticus

Protein attributes

Sequence length743 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region134 – 1418Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3521Magnesium or manganese By similarity
Metal binding5501Magnesium or manganese By similarity
Metal binding5541Magnesium or manganese By similarity
Binding site1471Substrate By similarity PIRSR PIRSR009407-2
Binding site5491Substrate By similarity PIRSR PIRSR009407-2
Site2571Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4221Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
K0C4Y6 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: C6EC019216DC833D

FASTA74382,427
        10         20         30         40         50         60 
MTVKKSKIIY TLTDEAPLLA TASFLPIVEA FAGAAGIDVE VSDISLASRV LATFADQLPD 

        70         80         90        100        110        120 
DQKVPDALSE LGRLTQNPET NIIKLPNISA SVPQLKAIIN ELQGKGFDIP NYPEDPQTDE 

       130        140        150        160        170        180 
EKALQQKYGK VLGSAVNPVL REGNSDRRAP KAVKEYAKKN PHSMGKWSQA SRTHVSHMRS 

       190        200        210        220        230        240 
GDFYSSEKSL TLDKACKVNI EFVAKNGEVT VLKKGLALQE GEIIDSMFMS KKQLCAYLED 

       250        260        270        280        290        300 
EMNDAKETGV MFSFHVKATM MKVSHPIVFG HAVKVYYKDL FEKHGKLFDE LGVNPNDGLS 

       310        320        330        340        350        360 
SVYEHIEKLP ASIKEEILSD MHACYEKRPE LAMVDSAKGI SNLHTPNEVI VDASMPAMIR 

       370        380        390        400        410        420 
AGGKMWGPDG KMKDTKAVMP ESTFARIYQE IINFCKTHGE FDPTTMGTVP NVGLMAQKAE 

       430        440        450        460        470        480 
EYGSHDKTFE MKADGSTRIV DEEGNVLLEM DVEEGDIWRM CQVKDAPIQD WVKLAVKRAR 

       490        500        510        520        530        540 
LSNTPAVFWL DKYRPHENEL IKKVEKYLKD HDLTGVDIKI KSQTRAMRYT LERILRGKDT 

       550        560        570        580        590        600 
ISVTGNILRD YLTDLFPILE LGTSAKMLSI VPLMAGGGLF ETGAGGSAPK HVKQLIEENH 

       610        620        630        640        650        660 
LRWDSLGEFL ALCASLEHTA ISDDNAKAAV LAKTLDEATA KLLDTGKSPS RKTGELDNRG 

       670        680        690        700        710        720 
SHFYLALYWA QALAEQTEDE ALQAHFQPLA ASLTENEEKI VGTLTTEQWH AVDIGGYYKP 

       730        740 
DVDKVREVMR PSEIFNEALA SLK 

« Hide

References

[1]"Complete Genome Sequence of the Pyrene-Degrading Bacterium Cycloclasticus sp. Strain P1."
Lai Q., Li W., Wang B., Yu Z., Shao Z.
J. Bacteriol. 194:6677-6677(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: P1 EMBL AFT67605.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003230 Genomic DNA. Translation: AFT67605.1.
RefSeqYP_006838108.1. NC_018697.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFT67605; AFT67605; Q91_1570.
GeneID13772762.
KEGGcyq:Q91_1570.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK0C4Y6_CYCSP
AccessionPrimary (citable) accession number: K0C4Y6
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)