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K0AZP3 (K0AZP3_CLOA9) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf1 EMBL AFS79268.1
Synonyms:tuf HAMAP-Rule MF_00118, tuf2 EMBL AFS79282.1
ORF Names:Curi_c22650 EMBL AFS79268.1, Curi_c22790 EMBL AFS79282.1
OrganismClostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) [Complete proteome] [HAMAP] EMBL AFS79268.1
Taxonomic identifier1128398 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
K0AZP3 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 868B3C7DA3BCE40D

FASTA39743,486
        10         20         30         40         50         60 
MGKAKFERSK PHVNIGTIGH VDHGKTTLTA AITTVLHARL GTGEGIAYDN IDKAPEERER 

        70         80         90        100        110        120 
GITISTSHVE YETENRHYAH VDCPGHADYV KNMITGAAQM DGAILVCSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLSRQVGVP TIVVFLNKAD MVNDEELIEL VEMEVRELLS EYEFDGDNTP IVVGSALKAL 

       190        200        210        220        230        240 
EDPSSEWGDK ILELMAAVDE TIPTPERDTD KAFLMPVEDI FSITGRGTVA TGKVERGVLK 

       250        260        270        280        290        300 
VQDNVEIVGI AEESRTVVCT GIEMFRKLLD DAQAGDNIGA LLRGVQREDI QRGQVLAKPG 

       310        320        330        340        350        360 
SITPHTHFEA EVYVLNKEEG GRHTPFFDGY RPQFYFRTTD VTGSIKLEEG VEMVMPGDNA 

       370        380        390 
KFTIELISPI AMEEGLRFAV REGGRTVGSG VISKILK

« Hide

References

[1]"The purine-utilizing bacterium Clostridium acidurici 9a: a genome-guided metabolic reconsideration."
Hartwich K., Poehlein A., Daniel R.
PLoS ONE 7:E51662-E51662(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a EMBL AFS79268.1 and ATCC 7906 / DSM 604 / KCTC 5404 / 9a.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003326 Genomic DNA. Translation: AFS79268.1.
CP003326 Genomic DNA. Translation: AFS79282.1.
RefSeqYP_006789115.1. NC_018664.1.
YP_006789129.1. NC_018664.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS79268; AFS79268; Curi_c22650.
AFS79282; AFS79282; Curi_c22790.
GeneID13711378.
13711392.
KEGGcad:Curi_c22650.
cad:Curi_c22790.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK0AZP3_CLOA9
AccessionPrimary (citable) accession number: K0AZP3
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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