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J9ZEA7 (J9ZEA7_LEPFM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:LFML04_2516 EMBL AFS54704.1
OrganismLeptospirillum ferriphilum (strain ML-04) [Complete proteome] [HAMAP] EMBL AFS54704.1
Taxonomic identifier1048260 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum

Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
J9ZEA7 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: BC32CDE26CBEF0DD

FASTA39242,766
        10         20         30         40         50         60 
MSQEIIRATY TITSGDIRKA AALVAREMSL GVKKTHFENR STEGFEARVE DVREGPGKAV 

        70         80         90        100        110        120 
LSIDVPCQNI ASVYGLLLSI AGEISCLNIL KTIELTDFLP PSSLVDRLPG PAFGMEGIAK 

       130        140        150        160        170        180 
ARKHLKRPLF ITVIKPSQGL SPADYGKIAY ESLMGGMDVV KSDELLQEPF DRYVERLKAG 

       190        200        210        220        230        240 
LEAAKRAESE TGEAKWVMMH TVDAPSKMRE RYLEGARLGS KIAMLSPAAS GFPMLEELAR 

       250        260        270        280        290        300 
LEKAPIMAHM AMSGWLWHKD GMSVRSWTKF MRLSGADIVL YPALEGTLKS RRKDLKDVHE 

       310        320        330        340        350        360 
ACLAPMGKAK KSLIAVGGGM HAGTMGVHAK LFGPDFVYIC GGGVCAHPGG PRSGGKSIRQ 

       370        380        390 
AWEAHSQGIP LEKFRKGHKE LDQALDAFKK YV 

« Hide

References

[1]"Complete genome of Leptospirillum ferriphilum ML-04 provides insight into its physiology and environmental adaptation."
Mi S., Song J., Lin J., Che Y., Zheng H., Lin J.
J. Microbiol. 49:890-901(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ML-04 EMBL AFS54704.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002919 Genomic DNA. Translation: AFS54704.1.
RefSeqYP_006767664.1. NC_018649.1.

3D structure databases

ProteinModelPortalJ9ZEA7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS54704; AFS54704; LFML04_2516.
GeneID13688590.
KEGGlfi:LFML04_2516.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9ZEA7_LEPFM
AccessionPrimary (citable) accession number: J9ZEA7
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)