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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

LFML04_2516

Organism
Leptospirillum ferriphilum (strain ML-04)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
Ordered Locus Names:LFML04_2516Imported
OrganismiLeptospirillum ferriphilum (strain ML-04)Imported
Taxonomic identifieri1048260 [NCBI]
Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum
ProteomesiUP000006177: Chromosome

Structurei

3D structure databases

ProteinModelPortaliJ9ZEA7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

J9ZEA7-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSQEIIRATY TITSGDIRKA AALVAREMSL GVKKTHFENR STEGFEARVE
60 70 80 90 100
DVREGPGKAV LSIDVPCQNI ASVYGLLLSI AGEISCLNIL KTIELTDFLP
110 120 130 140 150
PSSLVDRLPG PAFGMEGIAK ARKHLKRPLF ITVIKPSQGL SPADYGKIAY
160 170 180 190 200
ESLMGGMDVV KSDELLQEPF DRYVERLKAG LEAAKRAESE TGEAKWVMMH
210 220 230 240 250
TVDAPSKMRE RYLEGARLGS KIAMLSPAAS GFPMLEELAR LEKAPIMAHM
260 270 280 290 300
AMSGWLWHKD GMSVRSWTKF MRLSGADIVL YPALEGTLKS RRKDLKDVHE
310 320 330 340 350
ACLAPMGKAK KSLIAVGGGM HAGTMGVHAK LFGPDFVYIC GGGVCAHPGG
360 370 380 390
PRSGGKSIRQ AWEAHSQGIP LEKFRKGHKE LDQALDAFKK YV
Length:392
Mass (Da):42,766
Last modified:November 28, 2012 - v1
Checksum:iBC32CDE26CBEF0DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002919 Genomic DNA. Translation: AFS54704.1.
RefSeqiYP_006767664.1. NC_018649.1.

Genome annotation databases

EnsemblBacteriaiAFS54704; AFS54704; LFML04_2516.
GeneIDi13688590.
KEGGilfi:LFML04_2516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002919 Genomic DNA. Translation: AFS54704.1.
RefSeqiYP_006767664.1. NC_018649.1.

3D structure databases

ProteinModelPortaliJ9ZEA7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFS54704; AFS54704; LFML04_2516.
GeneIDi13688590.
KEGGilfi:LFML04_2516.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome of Leptospirillum ferriphilum ML-04 provides insight into its physiology and environmental adaptation."
    Mi S., Song J., Lin J., Che Y., Zheng H., Lin J.
    J. Microbiol. 49:890-901(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ML-04Imported.

Entry informationi

Entry nameiJ9ZEA7_LEPFM
AccessioniPrimary (citable) accession number: J9ZEA7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: January 7, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.