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J9Z921 (J9Z921_LEPFM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LFML04_0735 EMBL AFS52969.1
OrganismLeptospirillum ferriphilum (strain ML-04) [Complete proteome] [HAMAP] EMBL AFS52969.1
Taxonomic identifier1048260 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum

Protein attributes

Sequence length559 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
J9Z921 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: D4479816E49AA982

FASTA55965,334
        10         20         30         40         50         60 
MTDESLGKGW YKDAIIYEVH VKSFQDSNSD GWGDFIGLTG KLDYLQKLGV TALWLLPFTD 

        70         80         90        100        110        120 
SPLKDDGYDI RDYYKVHPPY GSMEDFQGFL EEAHKRGLRV ITELVMNHTS NTHPWFLSAS 

       130        140        150        160        170        180 
SSRSSPFRDY YVWSDTPDRY KGTRIIFSDT EKSNWTWEPK TRQYYWHRFF HHQPDLNFDN 

       190        200        210        220        230        240 
PKVQEEMLNV VKFWFSLGVD GLRCDAVPYL YEREGTNCEN LPETHAFIKR LRADIDREFP 

       250        260        270        280        290        300 
DRMLLAEANQ WPHDVLPYFG NDDEFHMAYH FPLMPRLFIA IAQGDRKPIT DILQQTPPIP 

       310        320        330        340        350        360 
EGCQWAIFLR NHDELTLEMV SDQERDYLWS TYAEDPRMRL NLGIRRRLAP LMGNDRRKID 

       370        380        390        400        410        420 
LMHSLLLTLP GTPILYYGDE IGMGDNIHLG DRNGVRTPMQ WSFDRNGGFS NADPSDLYAP 

       430        440        450        460        470        480 
PIQNPVYGYQ VVNVETQIRY PTSPLNVLRQ MIEVRQSTPV FGRGTMTVLH PKNRHVFACL 

       490        500        510        520        530        540 
RELGNDVVLV INNLSDRTES VLLDLSRFRG YRPVELFSQT LFPVLERAHF HFTVSPYGYF 

       550 
WLALRPPDAP VRSRKKIVR 

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References

[1]"Complete genome of Leptospirillum ferriphilum ML-04 provides insight into its physiology and environmental adaptation."
Mi S., Song J., Lin J., Che Y., Zheng H., Lin J.
J. Microbiol. 49:890-901(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ML-04 EMBL AFS52969.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002919 Genomic DNA. Translation: AFS52969.1.
RefSeqYP_006765929.1. NC_018649.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS52969; AFS52969; LFML04_0735.
GeneID13686335.
KEGGlfi:LFML04_0735.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9Z921_LEPFM
AccessionPrimary (citable) accession number: J9Z921
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)