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J9Z8Y3 (J9Z8Y3_LEPFM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LFML04_0731 EMBL AFS52965.1
OrganismLeptospirillum ferriphilum (strain ML-04) [Complete proteome] [HAMAP] EMBL AFS52965.1
Taxonomic identifier1048260 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
J9Z8Y3 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 385010175AA335DD

FASTA45751,800
        10         20         30         40         50         60 
MLTRRRHSQT RDDSLSATYG NRFFTKDLKT FRMGEDSLPP ASVYQIIHDE LELDGNPSLN 

        70         80         90        100        110        120 
LASFVTTWME PEAEQLIREN LRKNLVDQSE YPRTGEIQHR VIHMLADLFH APDDADIAGT 

       130        140        150        160        170        180 
STIGSSEAIL LGLLAHKKSW QNRRKTAGKP ADRPNLVLGG EVHVVWDKFA RYFDVELRTV 

       190        200        210        220        230        240 
PLSPARFTLD VQEAVRRIDE NTIAVGAVVG TTFTGQIDPV EELNEAVEKK NREQGWRVPI 

       250        260        270        280        290        300 
HVDGASGGLI LPFLEPERRW DFRLSAVRSI NVSGHKFGLV YPGVGWLLFR DRKDLPDDLV 

       310        320        330        340        350        360 
FRVNYLGAEE ETYTLNFSSN AAFVIAQYYN LLRLGKKGYR SIMENCRDNA RFLAKELAAG 

       370        380        390        400        410        420 
KTFEPVEKKP LLPIVAFRLR GKHAGREPEI ASELRKYGWI VPAYTLPPDA ENITLLRVVV 

       430        440        450 
RENVSRQMLV ELLAHLDRCA GILENPATKR KTHPPLC 

« Hide

References

[1]"Complete genome of Leptospirillum ferriphilum ML-04 provides insight into its physiology and environmental adaptation."
Mi S., Song J., Lin J., Che Y., Zheng H., Lin J.
J. Microbiol. 49:890-901(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ML-04 EMBL AFS52965.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002919 Genomic DNA. Translation: AFS52965.1.
RefSeqYP_006765925.1. NC_018649.1.

3D structure databases

ProteinModelPortalJ9Z8Y3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS52965; AFS52965; LFML04_0731.
GeneID13686331.
KEGGlfi:LFML04_0731.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9Z8Y3_LEPFM
AccessionPrimary (citable) accession number: J9Z8Y3
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)