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J9Z8Y3

- J9Z8Y3_LEPFM

UniProt

J9Z8Y3 - J9Z8Y3_LEPFM

Protein

Glutamate decarboxylase

Gene

LFML04_0731

Organism
Leptospirillum ferriphilum (strain ML-04)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:LFML04_0731Imported
    OrganismiLeptospirillum ferriphilum (strain ML-04)Imported
    Taxonomic identifieri1048260 [NCBI]
    Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum
    ProteomesiUP000006177: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliJ9Z8Y3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    J9Z8Y3-1 [UniParc]FASTAAdd to Basket

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    MLTRRRHSQT RDDSLSATYG NRFFTKDLKT FRMGEDSLPP ASVYQIIHDE    50
    LELDGNPSLN LASFVTTWME PEAEQLIREN LRKNLVDQSE YPRTGEIQHR 100
    VIHMLADLFH APDDADIAGT STIGSSEAIL LGLLAHKKSW QNRRKTAGKP 150
    ADRPNLVLGG EVHVVWDKFA RYFDVELRTV PLSPARFTLD VQEAVRRIDE 200
    NTIAVGAVVG TTFTGQIDPV EELNEAVEKK NREQGWRVPI HVDGASGGLI 250
    LPFLEPERRW DFRLSAVRSI NVSGHKFGLV YPGVGWLLFR DRKDLPDDLV 300
    FRVNYLGAEE ETYTLNFSSN AAFVIAQYYN LLRLGKKGYR SIMENCRDNA 350
    RFLAKELAAG KTFEPVEKKP LLPIVAFRLR GKHAGREPEI ASELRKYGWI 400
    VPAYTLPPDA ENITLLRVVV RENVSRQMLV ELLAHLDRCA GILENPATKR 450
    KTHPPLC 457
    Length:457
    Mass (Da):51,800
    Last modified:November 28, 2012 - v1
    Checksum:i385010175AA335DD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002919 Genomic DNA. Translation: AFS52965.1.
    RefSeqiWP_014960475.1. NC_018649.1.
    YP_006765925.1. NC_018649.1.

    Genome annotation databases

    EnsemblBacteriaiAFS52965; AFS52965; LFML04_0731.
    GeneIDi13686331.
    KEGGilfi:LFML04_0731.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002919 Genomic DNA. Translation: AFS52965.1 .
    RefSeqi WP_014960475.1. NC_018649.1.
    YP_006765925.1. NC_018649.1.

    3D structure databases

    ProteinModelPortali J9Z8Y3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFS52965 ; AFS52965 ; LFML04_0731 .
    GeneIDi 13686331.
    KEGGi lfi:LFML04_0731.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome of Leptospirillum ferriphilum ML-04 provides insight into its physiology and environmental adaptation."
      Mi S., Song J., Lin J., Che Y., Zheng H., Lin J.
      J. Microbiol. 49:890-901(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ML-04Imported.

    Entry informationi

    Entry nameiJ9Z8Y3_LEPFM
    AccessioniPrimary (citable) accession number: J9Z8Y3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3