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J9YI02

- J9YI02_LEUGJ

UniProt

J9YI02 - J9YI02_LEUGJ

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Protein

Alanine racemase

Gene
alr, C269_01040
Organism
Leuconostoc gelidum (strain JB7)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei39 – 391Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei136 – 1361Substrate By similarityUniRule annotation
Active sitei265 – 2651Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei312 – 3121Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Name:alrImported
Ordered Locus Names:C269_01040Imported
OrganismiLeuconostoc gelidum (strain JB7)Imported
Taxonomic identifieri1229756 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc
ProteomesiUP000006279: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei39 – 391N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliJ9YI02.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9YI02-1 [UniParc]FASTAAdd to Basket

« Hide

MVEAITRPTQ IEISKKALKH NVAVVKQTSG ADKIFLAVKS NAYGLGLVPT    50
SQAAVAGGVY GLAVAVIDEA LALRHERITE PILVLGISQA KYAELMAVQH 100
IMATVVSLSW LKEAAQSLTG EQRLQVSLGV DTGMGRIGFR TRESLAQAIT 150
YLQAHKDIFD YVGLATHFAE SDSVQTDYFY MQLKRWHDLT DGLPEPKYYH 200
VANSGAAMYH ADEVPHEVIR VGTVLYGVEP SRGELADGKN LQPVMSLRSE 250
MNFVKQLPAG EGISYSHKYT TSGDEWIGTV PIGYGDGWLR KMTGFSVIVD 300
GQYAPIVGQV AMDQLMIKLP HEYPVGTKVT LIGKDGDLEN TLENVAQHAN 350
LAPWEIMTGM QDRLHRILVD 370
Length:370
Mass (Da):40,562
Last modified:November 28, 2012 - v1
Checksum:i6D7E03E02CBCFA22
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003839 Genomic DNA. Translation: AFS39655.1.
RefSeqiWP_010016061.1. NC_018631.1.
YP_006744541.1. NC_018631.1.

Genome annotation databases

EnsemblBacteriaiAFS39655; AFS39655; C269_01040.
GeneIDi13671187.
KEGGilge:C269_01040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003839 Genomic DNA. Translation: AFS39655.1 .
RefSeqi WP_010016061.1. NC_018631.1.
YP_006744541.1. NC_018631.1.

3D structure databases

ProteinModelPortali J9YI02.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFS39655 ; AFS39655 ; C269_01040 .
GeneIDi 13671187.
KEGGi lge:C269_01040.

Phylogenomic databases

KOi K01775.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Leuconostoc gelidum Strain JB7, Isolated from Kimchi."
    Jung J.Y., Lee S.H., Jeon C.O.
    J. Bacteriol. 194:6665-6665(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JB7Imported.

Entry informationi

Entry nameiJ9YI02_LEUGJ
AccessioniPrimary (citable) accession number: J9YI02
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi