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J9YI02 (J9YI02_LEUGJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608 HAMAP-Rule MF_01201
EC=5.1.1.1 RuleBase RU000608 HAMAP-Rule MF_01201
Gene names
Name:alr EMBL AFS39655.1
Ordered Locus Names:C269_01040 EMBL AFS39655.1
OrganismLeuconostoc gelidum (strain JB7) [Complete proteome] [HAMAP] EMBL AFS39655.1
Taxonomic identifier1229756 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Leuconostoc ›

Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. SAAS SAAS020622 RuleBase RU000608 HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS020622 RuleBase RU000608 HAMAP-Rule MF_01201

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247 HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site391Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2651Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1361Substrate By similarity HAMAP-Rule MF_01201
Binding site3121Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue391N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
J9YI02 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 6D7E03E02CBCFA22

FASTA37040,562
        10         20         30         40         50         60 
MVEAITRPTQ IEISKKALKH NVAVVKQTSG ADKIFLAVKS NAYGLGLVPT SQAAVAGGVY 

        70         80         90        100        110        120 
GLAVAVIDEA LALRHERITE PILVLGISQA KYAELMAVQH IMATVVSLSW LKEAAQSLTG 

       130        140        150        160        170        180 
EQRLQVSLGV DTGMGRIGFR TRESLAQAIT YLQAHKDIFD YVGLATHFAE SDSVQTDYFY 

       190        200        210        220        230        240 
MQLKRWHDLT DGLPEPKYYH VANSGAAMYH ADEVPHEVIR VGTVLYGVEP SRGELADGKN 

       250        260        270        280        290        300 
LQPVMSLRSE MNFVKQLPAG EGISYSHKYT TSGDEWIGTV PIGYGDGWLR KMTGFSVIVD 

       310        320        330        340        350        360 
GQYAPIVGQV AMDQLMIKLP HEYPVGTKVT LIGKDGDLEN TLENVAQHAN LAPWEIMTGM 

       370 
QDRLHRILVD

« Hide

References

[1]"Complete Genome Sequence of Leuconostoc gelidum Strain JB7, Isolated from Kimchi."
Jung J.Y., Lee S.H., Jeon C.O.
J. Bacteriol. 194:6665-6665(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JB7 EMBL AFS39655.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003839 Genomic DNA. Translation: AFS39655.1.
RefSeqYP_006744541.1. NC_018631.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS39655; AFS39655; C269_01040.
GeneID13671187.
KEGGlge:C269_01040.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9YI02_LEUGJ
AccessionPrimary (citable) accession number: J9YI02
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 29, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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