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J9YF56

- J9YF56_ALTMA

UniProt

J9YF56 - J9YF56_ALTMA

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, MASE_16245
Organism
Alteromonas macleodii ATCC 27126
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei133 – 1331 By similarityUniRule annotation
Active sitei538 – 5381 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:MASE_16245Imported
OrganismiAlteromonas macleodii ATCC 27126Imported
Taxonomic identifieri529120 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
ProteomesiUP000006102: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9YF56-1 [UniParc]FASTAAdd to Basket

« Hide

MQTHYDAELK DTVRYLGKTL GETIKNQLGQ EWLDRIEKIR KGGRASYQGD    50
ATCSEELKET FKTMSDSDLL TVGRAFAQFL NLGNIAEQEY NAAMNVDASI 100
DALFKHLDKA ELTAEKVQDA VAKLNIDLVL TAHPTEVTRR TLIHKHKELA 150
NCLQAIHQES LNDVERKKIE TRIADLIAQA WHTEEIRSVR PTPVDEARWG 200
FSVIENSLWE AVPDFMRELD GRLNEDYEVS LPLDASPVQF SSWMGGDRDG 250
NPFVTSKVTE QVLLLARKRA AKLFAIDLDR LQVELSMYDC NDALREKVGD 300
ANEPYRALLR PLVDKFIATR DGISDYLAGK NPDTSNWVES DDELIEPLML 350
CYQSLLDCGM QVVANGLLLD TIRRARVFGI HLLRLDVRQD SERHADVFSE 400
LTRYLGLGDY AQWSEADKQA FLLRELGSKR PLFPAQWDAS DDVKEVLDTC 450
KVIAKHSKHG FGIYIISMAS EPSDVMAVQL LLQESGVDWP MPVAPLFETL 500
DDLNNSPDVM RKLLSIDWYR GYVKGRQFVM IGYSDSAKDA GALAAGWAQY 550
QSQEALVAIA DEFDVSLTLF HGRGGTIGRG GLPAHAAIYS QPPGSLDGGF 600
RVTEQGETIR YKFGMPKLAK RSLGIYASAI IEAMLFPPPA PKEEWRELIT 650
AMAAQGRDNY RATVRHDKEF VPYFRVATPE QELGKLPLGS RPAKRKPQGG 700
IESLRAIPWI FAWAQTRLVL PSWLGVMRAI DSVKTPENEK VVNEMFSEWP 750
FYRSRLSMLD MVFHKADPRI SEAYDERLVP KELKHFGEAL RSELKESISS 800
LLAITGDGDI MKNDPQGKES MEIRAAYLQP LHYLQIELLD RIRKAGDDAQ 850
NTSLERAMMV TIAGIAIGMR NTG 873
Length:873
Mass (Da):98,216
Last modified:November 28, 2012 - v1
Checksum:i377351AB99BD43FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38745.1.
RefSeqiWP_014950801.1. NC_018632.1.
YP_006749299.1. NC_018632.1.

Genome annotation databases

EnsemblBacteriaiAFS38745; AFS38745; MASE_16245.
GeneIDi13670154.
KEGGiamac:MASE_16245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38745.1 .
RefSeqi WP_014950801.1. NC_018632.1.
YP_006749299.1. NC_018632.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFS38745 ; AFS38745 ; MASE_16245 .
GeneIDi 13670154.
KEGGi amac:MASE_16245.

Phylogenomic databases

KOi K01595.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
    Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
    ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27126Imported.

Entry informationi

Entry nameiJ9YF56_ALTMA
AccessioniPrimary (citable) accession number: J9YF56
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: September 3, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi