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J9YF56

- J9YF56_ALTMA

UniProt

J9YF56 - J9YF56_ALTMA

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Alteromonas macleodii ATCC 27126
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei133 – 1331UniRule annotation
    Active sitei538 – 5381UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    ORF Names:MASE_16245Imported
    OrganismiAlteromonas macleodii ATCC 27126Imported
    Taxonomic identifieri529120 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000006102: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    J9YF56-1 [UniParc]FASTAAdd to Basket

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    MQTHYDAELK DTVRYLGKTL GETIKNQLGQ EWLDRIEKIR KGGRASYQGD    50
    ATCSEELKET FKTMSDSDLL TVGRAFAQFL NLGNIAEQEY NAAMNVDASI 100
    DALFKHLDKA ELTAEKVQDA VAKLNIDLVL TAHPTEVTRR TLIHKHKELA 150
    NCLQAIHQES LNDVERKKIE TRIADLIAQA WHTEEIRSVR PTPVDEARWG 200
    FSVIENSLWE AVPDFMRELD GRLNEDYEVS LPLDASPVQF SSWMGGDRDG 250
    NPFVTSKVTE QVLLLARKRA AKLFAIDLDR LQVELSMYDC NDALREKVGD 300
    ANEPYRALLR PLVDKFIATR DGISDYLAGK NPDTSNWVES DDELIEPLML 350
    CYQSLLDCGM QVVANGLLLD TIRRARVFGI HLLRLDVRQD SERHADVFSE 400
    LTRYLGLGDY AQWSEADKQA FLLRELGSKR PLFPAQWDAS DDVKEVLDTC 450
    KVIAKHSKHG FGIYIISMAS EPSDVMAVQL LLQESGVDWP MPVAPLFETL 500
    DDLNNSPDVM RKLLSIDWYR GYVKGRQFVM IGYSDSAKDA GALAAGWAQY 550
    QSQEALVAIA DEFDVSLTLF HGRGGTIGRG GLPAHAAIYS QPPGSLDGGF 600
    RVTEQGETIR YKFGMPKLAK RSLGIYASAI IEAMLFPPPA PKEEWRELIT 650
    AMAAQGRDNY RATVRHDKEF VPYFRVATPE QELGKLPLGS RPAKRKPQGG 700
    IESLRAIPWI FAWAQTRLVL PSWLGVMRAI DSVKTPENEK VVNEMFSEWP 750
    FYRSRLSMLD MVFHKADPRI SEAYDERLVP KELKHFGEAL RSELKESISS 800
    LLAITGDGDI MKNDPQGKES MEIRAAYLQP LHYLQIELLD RIRKAGDDAQ 850
    NTSLERAMMV TIAGIAIGMR NTG 873
    Length:873
    Mass (Da):98,216
    Last modified:November 28, 2012 - v1
    Checksum:i377351AB99BD43FD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003841 Genomic DNA. Translation: AFS38745.1.
    RefSeqiWP_014950801.1. NC_018632.1.
    YP_006749299.1. NC_018632.1.

    Genome annotation databases

    EnsemblBacteriaiAFS38745; AFS38745; MASE_16245.
    GeneIDi13670154.
    KEGGiamac:MASE_16245.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003841 Genomic DNA. Translation: AFS38745.1 .
    RefSeqi WP_014950801.1. NC_018632.1.
    YP_006749299.1. NC_018632.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFS38745 ; AFS38745 ; MASE_16245 .
    GeneIDi 13670154.
    KEGGi amac:MASE_16245.

    Phylogenomic databases

    KOi K01595.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
      Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
      ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27126Imported.

    Entry informationi

    Entry nameiJ9YF56_ALTMA
    AccessioniPrimary (citable) accession number: J9YF56
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3