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J9YF56 (J9YF56_ALTMA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
ORF Names:MASE_16245 EMBL AFS38745.1
OrganismAlteromonas macleodii ATCC 27126 [Complete proteome] EMBL AFS38745.1
Taxonomic identifier529120 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length873 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1331 By similarity HAMAP-Rule MF_00595
Active site5381 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
J9YF56 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 377351AB99BD43FD

FASTA87398,216
        10         20         30         40         50         60 
MQTHYDAELK DTVRYLGKTL GETIKNQLGQ EWLDRIEKIR KGGRASYQGD ATCSEELKET 

        70         80         90        100        110        120 
FKTMSDSDLL TVGRAFAQFL NLGNIAEQEY NAAMNVDASI DALFKHLDKA ELTAEKVQDA 

       130        140        150        160        170        180 
VAKLNIDLVL TAHPTEVTRR TLIHKHKELA NCLQAIHQES LNDVERKKIE TRIADLIAQA 

       190        200        210        220        230        240 
WHTEEIRSVR PTPVDEARWG FSVIENSLWE AVPDFMRELD GRLNEDYEVS LPLDASPVQF 

       250        260        270        280        290        300 
SSWMGGDRDG NPFVTSKVTE QVLLLARKRA AKLFAIDLDR LQVELSMYDC NDALREKVGD 

       310        320        330        340        350        360 
ANEPYRALLR PLVDKFIATR DGISDYLAGK NPDTSNWVES DDELIEPLML CYQSLLDCGM 

       370        380        390        400        410        420 
QVVANGLLLD TIRRARVFGI HLLRLDVRQD SERHADVFSE LTRYLGLGDY AQWSEADKQA 

       430        440        450        460        470        480 
FLLRELGSKR PLFPAQWDAS DDVKEVLDTC KVIAKHSKHG FGIYIISMAS EPSDVMAVQL 

       490        500        510        520        530        540 
LLQESGVDWP MPVAPLFETL DDLNNSPDVM RKLLSIDWYR GYVKGRQFVM IGYSDSAKDA 

       550        560        570        580        590        600 
GALAAGWAQY QSQEALVAIA DEFDVSLTLF HGRGGTIGRG GLPAHAAIYS QPPGSLDGGF 

       610        620        630        640        650        660 
RVTEQGETIR YKFGMPKLAK RSLGIYASAI IEAMLFPPPA PKEEWRELIT AMAAQGRDNY 

       670        680        690        700        710        720 
RATVRHDKEF VPYFRVATPE QELGKLPLGS RPAKRKPQGG IESLRAIPWI FAWAQTRLVL 

       730        740        750        760        770        780 
PSWLGVMRAI DSVKTPENEK VVNEMFSEWP FYRSRLSMLD MVFHKADPRI SEAYDERLVP 

       790        800        810        820        830        840 
KELKHFGEAL RSELKESISS LLAITGDGDI MKNDPQGKES MEIRAAYLQP LHYLQIELLD 

       850        860        870 
RIRKAGDDAQ NTSLERAMMV TIAGIAIGMR NTG 

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References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27126 EMBL AFS38745.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003841 Genomic DNA. Translation: AFS38745.1.
RefSeqYP_006749299.1. NC_018632.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS38745; AFS38745; MASE_16245.
GeneID13670154.
KEGGamac:MASE_16245.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01595.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9YF56_ALTMA
AccessionPrimary (citable) accession number: J9YF56
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: June 11, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)