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J9YF56

- J9YF56_ALTMA

UniProt

J9YF56 - J9YF56_ALTMA

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Alteromonas macleodii ATCC 27126
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei133 – 1331UniRule annotation
Active sitei538 – 5381UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:MASE_16245Imported
OrganismiAlteromonas macleodii ATCC 27126Imported
Taxonomic identifieri529120 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
ProteomesiUP000006102: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9YF56-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQTHYDAELK DTVRYLGKTL GETIKNQLGQ EWLDRIEKIR KGGRASYQGD
60 70 80 90 100
ATCSEELKET FKTMSDSDLL TVGRAFAQFL NLGNIAEQEY NAAMNVDASI
110 120 130 140 150
DALFKHLDKA ELTAEKVQDA VAKLNIDLVL TAHPTEVTRR TLIHKHKELA
160 170 180 190 200
NCLQAIHQES LNDVERKKIE TRIADLIAQA WHTEEIRSVR PTPVDEARWG
210 220 230 240 250
FSVIENSLWE AVPDFMRELD GRLNEDYEVS LPLDASPVQF SSWMGGDRDG
260 270 280 290 300
NPFVTSKVTE QVLLLARKRA AKLFAIDLDR LQVELSMYDC NDALREKVGD
310 320 330 340 350
ANEPYRALLR PLVDKFIATR DGISDYLAGK NPDTSNWVES DDELIEPLML
360 370 380 390 400
CYQSLLDCGM QVVANGLLLD TIRRARVFGI HLLRLDVRQD SERHADVFSE
410 420 430 440 450
LTRYLGLGDY AQWSEADKQA FLLRELGSKR PLFPAQWDAS DDVKEVLDTC
460 470 480 490 500
KVIAKHSKHG FGIYIISMAS EPSDVMAVQL LLQESGVDWP MPVAPLFETL
510 520 530 540 550
DDLNNSPDVM RKLLSIDWYR GYVKGRQFVM IGYSDSAKDA GALAAGWAQY
560 570 580 590 600
QSQEALVAIA DEFDVSLTLF HGRGGTIGRG GLPAHAAIYS QPPGSLDGGF
610 620 630 640 650
RVTEQGETIR YKFGMPKLAK RSLGIYASAI IEAMLFPPPA PKEEWRELIT
660 670 680 690 700
AMAAQGRDNY RATVRHDKEF VPYFRVATPE QELGKLPLGS RPAKRKPQGG
710 720 730 740 750
IESLRAIPWI FAWAQTRLVL PSWLGVMRAI DSVKTPENEK VVNEMFSEWP
760 770 780 790 800
FYRSRLSMLD MVFHKADPRI SEAYDERLVP KELKHFGEAL RSELKESISS
810 820 830 840 850
LLAITGDGDI MKNDPQGKES MEIRAAYLQP LHYLQIELLD RIRKAGDDAQ
860 870
NTSLERAMMV TIAGIAIGMR NTG
Length:873
Mass (Da):98,216
Last modified:November 28, 2012 - v1
Checksum:i377351AB99BD43FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38745.1.
RefSeqiYP_006749299.1. NC_018632.1.

Genome annotation databases

EnsemblBacteriaiAFS38745; AFS38745; MASE_16245.
GeneIDi13670154.
KEGGiamac:MASE_16245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38745.1 .
RefSeqi YP_006749299.1. NC_018632.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFS38745 ; AFS38745 ; MASE_16245 .
GeneIDi 13670154.
KEGGi amac:MASE_16245.

Phylogenomic databases

KOi K01595.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
    Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
    ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27126Imported.

Entry informationi

Entry nameiJ9YF56_ALTMA
AccessioniPrimary (citable) accession number: J9YF56
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 29, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3