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J9YD58 (J9YD58_ALTMA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:MASE_16915 EMBL AFS38873.1
OrganismAlteromonas macleodii ATCC 27126 [Complete proteome] EMBL AFS38873.1
Taxonomic identifier529120 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length572 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
J9YD58 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 228BE249DFC16E90

FASTA57263,795
        10         20         30         40         50         60 
MDRRSFIKLS SLAGASVAVS TGLAGCTVSA SANSQPQTNA TFTHGVASGD PLKDAVIIWT 

        70         80         90        100        110        120 
RAVPTSNLGS GSGSKSGLAK ADILWEMASD ADFANVISSG IVEAKAIHDF TVKVDVAGLS 

       130        140        150        160        170        180 
PARRYFYRFK SANNTSPVGE TRTLPEVDVS NVTFGIFSCS NYPAGFFTPY MEAAKDDNID 

       190        200        210        220        230        240 
YVLHLGDYIY EYDGEGYATE HAKEIGRTYA PDNDTELYTL TDYRNRYALY RTDEGLLALH 

       250        260        270        280        290        300 
QNKPFIVVWD DHEVTNDTYK DGAENHQADE GDFYERRAAA VQAYYEWLPI RPPFGTERLE 

       310        320        330        340        350        360 
IYRQFTFGKL LDLYMLDTRV LARDKQLEYA NYRDAETKAF DQARFMKDIG NPNRGLLGET 

       370        380        390        400        410        420 
QRTWLHSSMQ QSQAKWQVLG QQLLIGRMLF PVSIFNGVER KAIPDHVHRL ANIKRKQKQG 

       430        440        450        460        470        480 
GALSEQELAL INTVMPYNLD AWDGYPVERE QVLMQLKSIG KPVIALAGDT HNAWHNKLTL 

       490        500        510        520        530        540 
KDGTEVGVEL ATPGVTSPGM EHYLSMGDEK AKTLADDLPL LIEDLQYCNL HQRGFMTLTV 

       550        560        570 
SQDSAKATWH YVDAILTKAG KVVNTHSYEI KA 

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References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27126 EMBL AFS38873.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003841 Genomic DNA. Translation: AFS38873.1.
RefSeqYP_006749427.1. NC_018632.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS38873; AFS38873; MASE_16915.
GeneID13670293.
KEGGamac:MASE_16915.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01113.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMSSF56300. SSF56300. 4 hits.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9YD58_ALTMA
AccessionPrimary (citable) accession number: J9YD58
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: June 11, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)