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J9YC71

- J9YC71_ALTMA

UniProt

J9YC71 - J9YC71_ALTMA

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Protein
Submitted name:

Glutamate decarboxylase putative

Gene
MASE_17360
Organism
Alteromonas macleodii ATCC 27126
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase putativeImported
Gene namesi
ORF Names:MASE_17360Imported
OrganismiAlteromonas macleodii ATCC 27126Imported
Taxonomic identifieri529120 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
ProteomesiUP000006102: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

J9YC71-1 [UniParc]FASTAAdd to Basket

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MGEAQVSLEH LFRVFTKPEH KDSKLAQIEQ HLSDNILDFL SQHVVTKKTS    50
LEEIEKDFSD SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA 100
LPYFHLPLSK LMVGLNQNLV KIETSKAFTP LERQVLGMMH NLVYDQPQSF 150
YDNHLHSAAH SLGAFCSGGT IANITALWVA RNKLLGPQKG FSGVAKAGLA 200
AAYRHYNINN LGVMCSKRGH YSLSKAVDVL GLGREQLLTV PAPKQTLDPA 250
KALRIGKRYQ EEGNKLLAIV GVGGTTETGH VDPLDELADV AKELGCWFHV 300
DAAWGGATLF SARYRDRLKG IERADSVTID AHKQMYVPMG AGMALFKDPQ 350
NANAVRHHAQ YILRAGSKDL GATTLEGSRN GMAMMVYSAL HIFGRKGYEL 400
LIDRSIDKAK DFAQMIDKAQ DFELTTTPIL SLLTYRVCPA EVQEKLKHVN 450
AKTRNAINEK VDALVVAVQK QQREAGKSFV SRTRLEAPDY PSQCITVFRV 500
VLANPLTSHN DLAAILAEQH LIAKETQAWK ELMDFVRETE TVAS 544
Length:544
Mass (Da):60,152
Last modified:November 28, 2012 - v1
Checksum:iB98DDE34B1D367EB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38962.1.
RefSeqiYP_006749516.1. NC_018632.1.

Genome annotation databases

EnsemblBacteriaiAFS38962; AFS38962; MASE_17360.
GeneIDi13670382.
KEGGiamac:MASE_17360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003841 Genomic DNA. Translation: AFS38962.1 .
RefSeqi YP_006749516.1. NC_018632.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFS38962 ; AFS38962 ; MASE_17360 .
GeneIDi 13670382.
KEGGi amac:MASE_17360.

Phylogenomic databases

KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
    Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
    ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27126Imported.

Entry informationi

Entry nameiJ9YC71_ALTMA
AccessioniPrimary (citable) accession number: J9YC71
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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