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J9YC71

- J9YC71_ALTMA

UniProt

J9YC71 - J9YC71_ALTMA

Protein
Submitted name:

Glutamate decarboxylase putative

Gene

MASE_17360

Organism
Alteromonas macleodii ATCC 27126
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylase putativeImported
    Gene namesi
    ORF Names:MASE_17360Imported
    OrganismiAlteromonas macleodii ATCC 27126Imported
    Taxonomic identifieri529120 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000006102: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    J9YC71-1 [UniParc]FASTAAdd to Basket

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    MGEAQVSLEH LFRVFTKPEH KDSKLAQIEQ HLSDNILDFL SQHVVTKKTS    50
    LEEIEKDFSD SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA 100
    LPYFHLPLSK LMVGLNQNLV KIETSKAFTP LERQVLGMMH NLVYDQPQSF 150
    YDNHLHSAAH SLGAFCSGGT IANITALWVA RNKLLGPQKG FSGVAKAGLA 200
    AAYRHYNINN LGVMCSKRGH YSLSKAVDVL GLGREQLLTV PAPKQTLDPA 250
    KALRIGKRYQ EEGNKLLAIV GVGGTTETGH VDPLDELADV AKELGCWFHV 300
    DAAWGGATLF SARYRDRLKG IERADSVTID AHKQMYVPMG AGMALFKDPQ 350
    NANAVRHHAQ YILRAGSKDL GATTLEGSRN GMAMMVYSAL HIFGRKGYEL 400
    LIDRSIDKAK DFAQMIDKAQ DFELTTTPIL SLLTYRVCPA EVQEKLKHVN 450
    AKTRNAINEK VDALVVAVQK QQREAGKSFV SRTRLEAPDY PSQCITVFRV 500
    VLANPLTSHN DLAAILAEQH LIAKETQAWK ELMDFVRETE TVAS 544
    Length:544
    Mass (Da):60,152
    Last modified:November 28, 2012 - v1
    Checksum:iB98DDE34B1D367EB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003841 Genomic DNA. Translation: AFS38962.1.
    RefSeqiYP_006749516.1. NC_018632.1.

    Genome annotation databases

    EnsemblBacteriaiAFS38962; AFS38962; MASE_17360.
    GeneIDi13670382.
    KEGGiamac:MASE_17360.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003841 Genomic DNA. Translation: AFS38962.1 .
    RefSeqi YP_006749516.1. NC_018632.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFS38962 ; AFS38962 ; MASE_17360 .
    GeneIDi 13670382.
    KEGGi amac:MASE_17360.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
      Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
      ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27126Imported.

    Entry informationi

    Entry nameiJ9YC71_ALTMA
    AccessioniPrimary (citable) accession number: J9YC71
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3