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J9Y1X5 (J9Y1X5_ALTMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS009006 HAMAP-Rule MF_01201

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1311Substrate By similarity HAMAP-Rule MF_01201
Binding site3011Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
J9Y1X5 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 491EA98233470346

FASTA35838,919
        10         20         30         40         50         60 
MSRQTQAIIH ADALLHNFKA LAALAPSSQS MAVVKADAYG HGAVNVARIL QHVSSRFAVA 

        70         80         90        100        110        120 
IIEEAIALRD AGISAPIVVL EGAHQAKECQ MAFQHNCILV MHCEEQLTWL ESCPEQQRPH 

       130        140        150        160        170        180 
IWLKVDSGMH RLGFALSDIE GITAKYNHLL SEQTVIATHF ACADDVDNNF TNTQIDAFNQ 

       190        200        210        220        230        240 
VASKLDLPTS VANSPATVNW PASRNAWNRL GVGVYGGAVS TSQNLDIEIY PAMTLRSSVL 

       250        260        270        280        290        300 
AVRTIPAGEG IGYGQTWVAS KPSKIATVGI GYADGYPRHC KNGTPVLIRG KRAYLVGRVS 

       310        320        330        340        350 
MDMITIDVTH IDNVAVGDEV ELWGQNVPIQ EVAANADTID YELMTRVSQR VPRIVKYL 

« Hide

References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27126 EMBL AFS35999.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003841 Genomic DNA. Translation: AFS35999.1.
RefSeqYP_006746553.1. NC_018632.1.

3D structure databases

ProteinModelPortalJ9Y1X5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS35999; AFS35999; MASE_02175.
GeneID13667362.
KEGGamac:MASE_02175.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9Y1X5_ALTMA
AccessionPrimary (citable) accession number: J9Y1X5
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)