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J9XJL4 (J9XJL4_CHLPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118 EMBL AFS27197.1
ORF Names:B711_0805 EMBL AFS27197.1
OrganismChlamydia psittaci CP3 EMBL AFS27197.1
Taxonomic identifier1050219 [NCBI]
Taxonomic lineageBacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia ›

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
J9XJL4 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 673827FED8E92FAE

FASTA39443,213
        10         20         30         40         50         60 
MSKETFQRTK PHINIGTIGH VDHGKTTLTA AITRALSAEG LANFCDYSSI DNTPEEKARG 

        70         80         90        100        110        120 
ITINASHVEY ETPNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSATD GAMPQTKEHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVFLNKIDM ISQEDAELVD LVEMELSELL EEKGYKGCPI IRGSALKALE 

       190        200        210        220        230        240 
GDASYVEKIR ELMQAVDDNI PTPEREVDKP FLMPIEDVFS ISGRGTVVTG RIERGVVKVG 

       250        260        270        280        290        300 
DKVQIVGLRD TRETIVTGVE MFRKELPEGQ AGENVGLLLR GIGKNDVERG MVICQPNSVK 

       310        320        330        340        350        360 
SHTQFKGTVY ILQKEEGGRH KPFFTGYRPQ FFFRTTDVTG VVTLPEGVEM VMPGDNVEFD 

       370        380        390 
VQLISPVALE EGMRFAIREG GRTIGAGTIS KIIA

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References

[1]"Full Genome Sequences of All Nine Chlamydia psittaci Genotype Reference Strains."
Van Lent S., Piet J.R., Beeckman D., van der Ende A., Van Nieuwerburgh F., Bavoil P., Myers G., Vanrompay D., Pannekoek Y.
J. Bacteriol. 194:6930-6931(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CP3 EMBL AFS27197.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003797 Genomic DNA. Translation: AFS27197.1.
RefSeqYP_006739762.1. NC_018625.1.

3D structure databases

ProteinModelPortalJ9XJL4.
SMRJ9XJL4. Positions 2-393.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID13663615.
KEGGcpsc:B711_0805.

Phylogenomic databases

KOK02358.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9XJL4_CHLPS
AccessionPrimary (citable) accession number: J9XJL4
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 1, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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