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J9W4U7 (J9W4U7_LACBU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length221 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding40 – 478ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding116 – 1194ATP By similarity HAMAP-Rule MF_00124

Sites

Active site1171Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1741Zinc By similarity HAMAP-Rule MF_00124
Metal binding1771Zinc By similarity HAMAP-Rule MF_00124
Metal binding2111Zinc By similarity HAMAP-Rule MF_00124
Metal binding2141Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
J9W4U7 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 1872649C9212D512

FASTA22125,829
        10         20         30         40         50         60 
MRVLANFLII IDFQNFFCIM EEKLLRKKVD ILAQLFYRYG AMNSGKTIEI IKVAHNYEEQ 

        70         80         90        100        110        120 
NKSVIIMTSA LDTREKQGMI ESRIGLERKA EPIREDTNVF DLVQELNPHA SCILIDEAQF 

       130        140        150        160        170        180 
LKKKHVMELA RIVDELNVPV MAFGLKNDFQ NNLFEGSKYL LLYADKIEEM KTICWFCGKK 

       190        200        210        220 
AIMNLRFHNG EPVYEGEQIQ MGGNESYYPV CRKHYYNPPI K 

« Hide

References

[1]"Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage."
Heinl S., Wibberg D., Eikmeyer F., Szczepanowski R., Blom J., Linke B., Goesmann A., Grabherr R., Schwab H., Puhler A., Schluter A.
J. Biotechnol. 161:153-166(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CD034 EMBL AFS00030.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003043 Genomic DNA. Translation: AFS00030.1.
RefSeqYP_006725612.1. NC_018610.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFS00030; AFS00030; LBUCD034_0986.
GeneID13655960.
KEGGlbn:LBUCD034_0986.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameJ9W4U7_LACBU
AccessionPrimary (citable) accession number: J9W4U7
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)