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J9UB96

- J9UB96_BRAPL

UniProt

J9UB96 - J9UB96_BRAPL

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Protein

Elongation factor Tu

Gene

el-tu

Organism
Brachyspira pilosicoli B2904
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi88 – 925GTPUniRule annotation
Nucleotide bindingi143 – 1464GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:el-tuImported
Synonyms:tufUniRule annotation
ORF Names:B2904_orf330Imported
OrganismiBrachyspira pilosicoli B2904Imported
Taxonomic identifieri1133568 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBrachyspiraceaeBrachyspira
ProteomesiUP000007346: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

J9UB96-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAKGTYEGTK THVNVGTIGH VDHGKTTLTS AITAVSSAMF PATVQKVAYD
60 70 80 90 100
SVAKASESQG RRDPTKILTI ATSHVEYESD NRHYAHVDCP GHADYIKNMI
110 120 130 140 150
TGAAQMDGAI LVVSAEDGVM PQTKEHVLLS RQVGVNYIVV FLNKCDKLDD
160 170 180 190 200
PEMAEIVEAE VVDVLDHYGF DGSKTPIIRG SAIKAIQAIE AGKDPRTDPD
210 220 230 240 250
CKCIIDLLNA LDTYIPDPVR ETDKDFLMSI EDVYSIPGRG TVVTGRIERG
260 270 280 290 300
QIKKGDEVEI VGIRPTKKTT CTGVEMFKKE VVGIAGYNVG CLLRGIERKE
310 320 330 340 350
VERGQVLAKP GTITPHKKFE AEVYILKKEE GGRHSGFVSG YRPQMYFRTT
360 370 380 390 400
DVTGVINLPE GSPMIMPGDN ANLTIELITP IAMEEKQRFA IREGGKTVGN

GVVTKILE
Length:408
Mass (Da):44,463
Last modified:November 28, 2012 - v1
Checksum:i53FE904F3CC28931
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003490 Genomic DNA. Translation: AFR69686.1.
RefSeqiYP_006706434.1. NC_018607.1.

Genome annotation databases

EnsemblBacteriaiAFR69686; AFR69686; B2904_orf330.
GeneIDi13635555.
KEGGibpj:B2904_orf330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003490 Genomic DNA. Translation: AFR69686.1 .
RefSeqi YP_006706434.1. NC_018607.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFR69686 ; AFR69686 ; B2904_orf330 .
GeneIDi 13635555.
KEGGi bpj:B2904_orf330.

Phylogenomic databases

KOi K02358.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of Brachyspira pilosicoli strains: genome rearrangements, reductions and correlation of genetic compliment with phenotypic diversity."
    Mappley L.J., Black M.L., Abuoun M., Darby A.C., Woodward M.J., Parkhill J., Turner A.K., Bellgard M.I., La T., Phillips N.D., La Ragione R.M., Hampson D.J.
    BMC Genomics 13:454-454(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B2904Imported.

Entry informationi

Entry nameiJ9UB96_BRAPL
AccessioniPrimary (citable) accession number: J9UB96
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3