J9U8C4 (J9U8C4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MHC class II antigen EMBL AFR69060.1

Gene names

Name:

HLA-DPB1 EMBL AFR69060.1

Organism

Homo sapiens (Human) EMBL AFR69060.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	87 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Immunity
Cellular component	MHC II RuleBase RU000321 Membrane
Domain	Transmembrane RuleBase RU000321
Gene Ontology (GO)
Biological_process	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II Inferred from electronic annotation. Source: UniProtKB-KW immune response Inferred from electronic annotation. Source: InterPro
Cellular_component	MHC class II protein complex Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AFR69060.1
	Non-terminal residue	87	1	EMBL AFR69060.1

Sequences

	Sequence		Length	Mass (Da)
	J9U8C4 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: 7A3FB92322A849DC	FASTA	87	10,571
	10 20 30 40 50 60 NYLFQGRQEC YAFNGTQRFL ERYIYNREEL VRFDSDVGEF RAVTELGRPE AEYWNSQKDI 70 80 LEEKRAVPDR MCRHNYELDE AVTLQRP

References

[1]	"Characterization of HLA-DPB1 novel alleles in Chinese individuals." Xu Y., Deng Z. Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	JX291163 Genomic DNA. Translation: AFR69060.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	3.10.320.10. 1 hit.
InterPro	IPR011162. MHC_I/II-like_Ag-recog. IPR014745. MHC_II_a/b_N. IPR000353. MHC_II_b_N. [Graphical view]
Pfam	PF00969. MHC_II_beta. 1 hit. [Graphical view]
ProDom	PD000328. MHC_II_b_N. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00921. MHC_II_beta. 1 hit. [Graphical view]
SUPFAM	SSF54452. MHC_I/II-like_Ag-recog. 1 hit.
ProtoNet	Search...

Entry information

Entry name

J9U8C4_HUMAN

Accession

Primary (citable) accession number: J9U8C4

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	March 6, 2013
This is version 4 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.