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J9SN86 (J9SN86_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:KTR9_3313 EMBL AFR49948.1
OrganismGordonia sp. KTR9 [Complete proteome] EMBL AFR49948.1
Taxonomic identifier337191 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia

Protein attributes

Sequence length329 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
J9SN86 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 9F4AC70186AB759C

FASTA32937,367
        10         20         30         40         50         60 
MTVMAKTSAS AGDPIELEVG DRTVRLSSPD RVYFPERGET KRDLAEYYLS VGDGIVRALR 

        70         80         90        100        110        120 
DRPCMLHRFP KGVSGNKVHQ KRVPAGAPDW LETTEIYFPR FGRTADELCV TELASVIWAV 

       130        140        150        160        170        180 
QMSTVEFHPW NSRRADPETP DEWRIDLDPM PECTFPRVRR VAHVVEEVLD ELGMRGFPKT 

       190        200        210        220        230        240 
SGGRGLHIYV RIAPEWGFPQ VRRAALAFAR EVERRAPDDV TTTWWRKDRD PAAVFVDYNQ 

       250        260        270        280        290        300 
NTRDHTMASA YSVRGNERAT VSTPITWAEI DDIEPDDFTI ATVPARFAEL GDLHGEIDDV 

       310        320 
AHRLDTLIDW ADRDDIGDDE GAEVIDMDR 

« Hide

References

[1]"Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR49948.1.
[2]"Complete genome sequence of Gordonia sp. KTR9."
Chen H.-P., Lau A., Davis A.E., Zhu S., Eng S.W.M., Howes C.G., Crocker F.H., Indest K.J., Hallam S.J., Eltis L.D.
Appl. Environ. Microbiol. 0:0-0(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR49948.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002907 Genomic DNA. Translation: AFR49948.1.
RefSeqYP_006670104.1. NC_018581.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR49948; AFR49948; KTR9_3313.
GeneID13566910.
KEGGgor:KTR9_3313.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9SN86_9ACTO
AccessionPrimary (citable) accession number: J9SN86
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)