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Protein
Submitted name:

Putative eukaryotic-type DNA primase

Gene

KTR9_3313

Organism
Gordonia sp. KTR9
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative eukaryotic-type DNA primaseImported
Gene namesi
ORF Names:KTR9_3313Imported
OrganismiGordonia sp. KTR9Imported
Taxonomic identifieri337191 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesGordoniaceaeGordonia
ProteomesiUP000003281 Componenti: Chromosome

Family & Domainsi

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

J9SN86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVMAKTSAS AGDPIELEVG DRTVRLSSPD RVYFPERGET KRDLAEYYLS
60 70 80 90 100
VGDGIVRALR DRPCMLHRFP KGVSGNKVHQ KRVPAGAPDW LETTEIYFPR
110 120 130 140 150
FGRTADELCV TELASVIWAV QMSTVEFHPW NSRRADPETP DEWRIDLDPM
160 170 180 190 200
PECTFPRVRR VAHVVEEVLD ELGMRGFPKT SGGRGLHIYV RIAPEWGFPQ
210 220 230 240 250
VRRAALAFAR EVERRAPDDV TTTWWRKDRD PAAVFVDYNQ NTRDHTMASA
260 270 280 290 300
YSVRGNERAT VSTPITWAEI DDIEPDDFTI ATVPARFAEL GDLHGEIDDV
310 320
AHRLDTLIDW ADRDDIGDDE GAEVIDMDR
Length:329
Mass (Da):37,367
Last modified:November 28, 2012 - v1
Checksum:i9F4AC70186AB759C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR49948.1.
RefSeqiWP_014927534.1. NC_018581.1.
YP_006670104.1. NC_018581.1.

Genome annotation databases

EnsemblBacteriaiAFR49948; AFR49948; KTR9_3313.
KEGGigor:KTR9_3313.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR49948.1.
RefSeqiWP_014927534.1. NC_018581.1.
YP_006670104.1. NC_018581.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR49948; AFR49948; KTR9_3313.
KEGGigor:KTR9_3313.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
    Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
    Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KTR9Imported.

Entry informationi

Entry nameiJ9SN86_9ACTN
AccessioniPrimary (citable) accession number: J9SN86
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: June 24, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.