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J9SGJ5 (J9SGJ5_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:KTR9_2562 EMBL AFR49199.1
OrganismGordonia sp. KTR9 [Complete proteome] EMBL AFR49199.1
Taxonomic identifier337191 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia

Protein attributes

Sequence length421 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
J9SGJ5 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: C145A9C59E5F4208

FASTA42144,892
        10         20         30         40         50         60 
MRDSRIIRCT YYLESEIDPS AAAALLAGEQ SSGTFVPVPG ESARIRERHA ARVADVRELG 

        70         80         90        100        110        120 
RVRPSLPSRH EPEKVRAAIA TIEFPMENVG VDLASLQTAI AGNLFELGEL FACRLQSVEL 

       130        140        150        160        170        180 
PDEFVGAHAG PAFGIGGTRN LISDASRGAL IGTIVKPNVG LSEDEFRLVV RELALASIDV 

       190        200        210        220        230        240 
IKDDELMTDP AYLPLERRVA VATDEIAKAE QVTGHQVMYA FNITGDLYGL RRRYDTVVNG 

       250        260        270        280        290        300 
GGRCVMLNIP IMGLPALELL RSFSSVPIHG HRAGLAASMR YPGLGVDYAV WQKLARLAGA 

       310        320        330        340        350        360 
DHLHVSGLGS KFYEPDDEVS RNVAALLTPL GDTITPLPVL SSGQNVSTPG PTFDAVQTTD 

       370        380        390        400        410        420 
VLMLAGGGVA AHPDGPAAGV RSLRQSWEAA VDGVTLEEAT RSYASDGDLH LAHAVEMFGG 


R 

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References

[1]"Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR49199.1.
[2]"Complete genome sequence of Gordonia sp. KTR9."
Chen H.-P., Lau A., Davis A.E., Zhu S., Eng S.W.M., Howes C.G., Crocker F.H., Indest K.J., Hallam S.J., Eltis L.D.
Appl. Environ. Microbiol. 0:0-0(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR49199.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002907 Genomic DNA. Translation: AFR49199.1.
RefSeqYP_006669355.1. NC_018581.1.

3D structure databases

ProteinModelPortalJ9SGJ5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR49199; AFR49199; KTR9_2562.
GeneID13566160.
KEGGgor:KTR9_2562.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9SGJ5_9ACTO
AccessionPrimary (citable) accession number: J9SGJ5
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)