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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

KTR9_2562

Organism
Gordonia sp. KTR9
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
ORF Names:KTR9_2562Imported
OrganismiGordonia sp. KTR9Imported
Taxonomic identifieri337191 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
ProteomesiUP000003281 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliJ9SGJ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

J9SGJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDSRIIRCT YYLESEIDPS AAAALLAGEQ SSGTFVPVPG ESARIRERHA
60 70 80 90 100
ARVADVRELG RVRPSLPSRH EPEKVRAAIA TIEFPMENVG VDLASLQTAI
110 120 130 140 150
AGNLFELGEL FACRLQSVEL PDEFVGAHAG PAFGIGGTRN LISDASRGAL
160 170 180 190 200
IGTIVKPNVG LSEDEFRLVV RELALASIDV IKDDELMTDP AYLPLERRVA
210 220 230 240 250
VATDEIAKAE QVTGHQVMYA FNITGDLYGL RRRYDTVVNG GGRCVMLNIP
260 270 280 290 300
IMGLPALELL RSFSSVPIHG HRAGLAASMR YPGLGVDYAV WQKLARLAGA
310 320 330 340 350
DHLHVSGLGS KFYEPDDEVS RNVAALLTPL GDTITPLPVL SSGQNVSTPG
360 370 380 390 400
PTFDAVQTTD VLMLAGGGVA AHPDGPAAGV RSLRQSWEAA VDGVTLEEAT
410 420
RSYASDGDLH LAHAVEMFGG R
Length:421
Mass (Da):44,892
Last modified:November 28, 2012 - v1
Checksum:iC145A9C59E5F4208
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR49199.1.
RefSeqiWP_014926911.1. NC_018581.1.
YP_006669355.1. NC_018581.1.

Genome annotation databases

EnsemblBacteriaiAFR49199; AFR49199; KTR9_2562.
KEGGigor:KTR9_2562.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR49199.1.
RefSeqiWP_014926911.1. NC_018581.1.
YP_006669355.1. NC_018581.1.

3D structure databases

ProteinModelPortaliJ9SGJ5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR49199; AFR49199; KTR9_2562.
KEGGigor:KTR9_2562.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
    Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
    Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KTR9Imported.

Entry informationi

Entry nameiJ9SGJ5_9ACTO
AccessioniPrimary (citable) accession number: J9SGJ5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 29, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.