SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

J9RWJ8

- J9RWJ8_9ACTO

UniProt

J9RWJ8 - J9RWJ8_9ACTO

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP-dependent DNA ligase

Gene
KTR9_0350
Organism
Gordonia sp. KTR9
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:KTR9_0350Imported
OrganismiGordonia sp. KTR9Imported
Taxonomic identifieri337191 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
ProteomesiUP000003281: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9RWJ8-1 [UniParc]FASTAAdd to Basket

« Hide

MSFMDLPVMP PVAPMLAKAV TSVPPQPDGS VAWSYEPKWD GFRALIFRDG    50
DEVSIGSRGG KDLARYFPEI VAAVKEELPE KVVLDGEIGV PALIGDTHRL 100
DWDSLAQRIH PAESRVTMLA EKTPAIFIGF DALALESTNV MAEPFEVRRE 150
ALLRAVGPGG RDRRVHVSRV TSDPAVAEDW FSAFEGAGLD GVVAKRLDGV 200
YVENKREMLK IKHKRTADCV IFGYRIHKSG TGIGSMLLGL YGDDGELRMV 250
GGAGAFSDAK RIELQQMFEP MRLDPENASP GEPTRWRSEK SGEWIPIRPE 300
LVAEFAYDQM ENHRFRHTVK FLRWRPDREP RSCGYDQLDV PLTYDLHDVL 350
EGE 353
Length:353
Mass (Da):39,476
Last modified:November 28, 2012 - v1
Checksum:iA40588E34C7BC904
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002907 Genomic DNA. Translation: AFR47016.1.
RefSeqiWP_014925088.1. NC_018581.1.
YP_006667152.1. NC_018581.1.

Genome annotation databases

EnsemblBacteriaiAFR47016; AFR47016; KTR9_0350.
GeneIDi13568200.
KEGGigor:KTR9_0350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002907 Genomic DNA. Translation: AFR47016.1 .
RefSeqi WP_014925088.1. NC_018581.1.
YP_006667152.1. NC_018581.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFR47016 ; AFR47016 ; KTR9_0350 .
GeneIDi 13568200.
KEGGi gor:KTR9_0350.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
    Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
    Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KTR9Imported.

Entry informationi

Entry nameiJ9RWJ8_9ACTO
AccessioniPrimary (citable) accession number: J9RWJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: September 3, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi