J9RWJ8 (J9RWJ8_9ACTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFR47016.1

Gene names

ORF Names:

KTR9_0350 EMBL AFR47016.1

Organism

Gordonia sp. KTR9 EMBL AFR47016.1

Taxonomic identifier

337191 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Gordoniaceae › Gordonia

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFR47016.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J9RWJ8 [UniParc]. Last modified November 28, 2012. Version 1. Checksum: A40588E34C7BC904	FASTA	353	39,476
	10 20 30 40 50 60 MSFMDLPVMP PVAPMLAKAV TSVPPQPDGS VAWSYEPKWD GFRALIFRDG DEVSIGSRGG 70 80 90 100 110 120 KDLARYFPEI VAAVKEELPE KVVLDGEIGV PALIGDTHRL DWDSLAQRIH PAESRVTMLA 130 140 150 160 170 180 EKTPAIFIGF DALALESTNV MAEPFEVRRE ALLRAVGPGG RDRRVHVSRV TSDPAVAEDW 190 200 210 220 230 240 FSAFEGAGLD GVVAKRLDGV YVENKREMLK IKHKRTADCV IFGYRIHKSG TGIGSMLLGL 250 260 270 280 290 300 YGDDGELRMV GGAGAFSDAK RIELQQMFEP MRLDPENASP GEPTRWRSEK SGEWIPIRPE 310 320 330 340 350 LVAEFAYDQM ENHRFRHTVK FLRWRPDREP RSCGYDQLDV PLTYDLHDVL EGE

References

[1]	"Genomic and Transcriptomic Studies of an RDX (Hexahydro-1,3,5-Trinitro-1,3,5-Triazine)-Degrading Actinobacterium." Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D. Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: KTR9 EMBL AFR47016.1.
[2]	"Complete genome sequence of Gordonia sp. KTR9." Chen H.-P., Lau A., Davis A.E., Zhu S., Eng S.W.M., Howes C.G., Crocker F.H., Indest K.J., Hallam S.J., Eltis L.D. Appl. Environ. Microbiol. 0:0-0(2012) Cited for: NUCLEOTIDE SEQUENCE. Strain: KTR9 EMBL AFR47016.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002907 Genomic DNA. Translation: AFR47016.1.
RefSeq	YP_006667152.1. NC_018581.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFR47016; AFR47016; KTR9_0350.
GeneID	13568200.
KEGG	gor:KTR9_0350.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

J9RWJ8_9ACTO

Accession

Primary (citable) accession number: J9RWJ8

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2012
Last sequence update:	November 28, 2012
Last modified:	April 3, 2013
This is version 4 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)