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J9RWJ2 (J9RWJ2_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:KTR9_0340 EMBL AFR47006.1
OrganismGordonia sp. KTR9 [Complete proteome] EMBL AFR47006.1
Taxonomic identifier337191 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia

Protein attributes

Sequence length474 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
J9RWJ2 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 205FFB6E2C0BE193

FASTA47452,872
        10         20         30         40         50         60 
MTTDEGVHNQ SGGARATTNI GDAMSLRTVF TRTGEATELP KFSLSDSMLL PETAYQIVHD 

        70         80         90        100        110        120 
EAMLDGNARL NLATFVSTWM DGEAQKLYAE TVDKNMIDKD EYPQTAAIED RCWRILADLW 

       130        140        150        160        170        180 
HNPDVENAIG TSTIGSSEAC MLGGLALKRH WQTRRRAEGK STENPNIVLS TAVQVCWEKF 

       190        200        210        220        230        240 
CNYFEVEPKW VPISPDHLVL DGHELEKYVD ENTIGVVAIM GQTYTGMYEP VTAIAAKLDE 

       250        260        270        280        290        300 
IQADTGLDVK IHIDGASGAM IAPFCQPDLE WDFRVDRVVS INTSGHKYGL VYPGVGWIVW 

       310        320        330        340        350        360 
RDTEALPESM VFHCSYLGGD MPTLALNFSR PGAQVLLQYY MFLRLGRDGF TQVQQGSLDV 

       370        380        390        400        410        420 
AQWLSSQIAQ IDGLELVSKG DTIPVFAWKL KAGHTENWNL YDLSDRLRMK GWLVPAYPMA 

       430        440        450        460        470 
DDLADLTVQR IVVRAGLSHD LARALIADIE TEVQFLDRLE SPMPREGDGS HFHH 

« Hide

References

[1]"Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR47006.1.
[2]"Complete genome sequence of Gordonia sp. KTR9."
Chen H.-P., Lau A., Davis A.E., Zhu S., Eng S.W.M., Howes C.G., Crocker F.H., Indest K.J., Hallam S.J., Eltis L.D.
Appl. Environ. Microbiol. 0:0-0(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KTR9 EMBL AFR47006.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002907 Genomic DNA. Translation: AFR47006.1.
RefSeqYP_006667142.1. NC_018581.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR47006; AFR47006; KTR9_0340.
GeneID13568190.
KEGGgor:KTR9_0340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ9RWJ2_9ACTO
AccessionPrimary (citable) accession number: J9RWJ2
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 16, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)