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Protein
Submitted name:

DNA primase, small subunit

Gene

KTR9_0351

Organism
Gordonia sp. KTR9
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase, small subunitImported
Gene namesi
ORF Names:KTR9_0351Imported
OrganismiGordonia sp. KTR9Imported
Taxonomic identifieri337191 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
ProteomesiUP000003281 Componenti: Chromosome

Family & Domainsi

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9REQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTMASRSPAE ELDVDGVAVR MSNPDKIYFP ELGENGGRKR DLVGYYRTVA
60 70 80 90 100
LGVGEDSEGP LMRAARDRPT FLQRFPDGVE GEEIYQKHIA KKRPEHVQST
110 120 130 140 150
PIVFPSKRTG DAIRPTVPAD LVWGANLGTV TFHTWPTLHP DNDHPDQLRI
160 170 180 190 200
DLDPQPGTTF DDVRRVAIEG LKPLLDELGF TGFVKTSGGR GVHVYVPIEP
210 220 230 240 250
LWDFIATRRC VIAIARELER RDPDAVTPSW WKEERGERIF IDFNQNARDR
260 270 280 290 300
TMASPYSVRR SARARVSTPV TWDELADVDP DDCTIATVPK LLADRGDPWA
310 320 330 340 350
DIADHRRGIE KLLEMVQADD ANGLGDMPYP PSYPKMPGEP PRVQPSKKVA
360
EHWDEKGNRR SDG
Length:363
Mass (Da):40,791
Last modified:November 28, 2012 - v1
Checksum:i37612D8CC1D76695
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR47017.1.
RefSeqiWP_014925089.1. NC_018581.1.
YP_006667153.1. NC_018581.1.

Genome annotation databases

EnsemblBacteriaiAFR47017; AFR47017; KTR9_0351.
KEGGigor:KTR9_0351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002907 Genomic DNA. Translation: AFR47017.1.
RefSeqiWP_014925089.1. NC_018581.1.
YP_006667153.1. NC_018581.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFR47017; AFR47017; KTR9_0351.
KEGGigor:KTR9_0351.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium."
    Chen H.P., Zhu S.H., Casabon I., Hallam S.J., Crocker F.H., Mohn W.W., Indest K.J., Eltis L.D.
    Appl. Environ. Microbiol. 78:7798-7800(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KTR9Imported.

Entry informationi

Entry nameiJ9REQ8_9ACTO
AccessioniPrimary (citable) accession number: J9REQ8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: April 29, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.