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J9R9T1

- J9R9T1_RIEAN

UniProt

J9R9T1 - J9R9T1_RIEAN

Protein
Submitted name:

Monomeric isocitrate dehydrogenase

Gene

B739_1889

Organism
Riemerella anatipestifer RA-CH-1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 magnesium or manganese ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei145 – 1451SubstrateUniRule annotation
    Sitei255 – 2551Critical for catalysisUniRule annotation
    Metal bindingi348 – 3481Magnesium or manganese
    Sitei418 – 4181Critical for catalysisUniRule annotation
    Binding sitei545 – 5451SubstrateUniRule annotation
    Metal bindingi546 – 5461Magnesium or manganese
    Metal bindingi550 – 5501Magnesium or manganese

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NADP+) activity Source: InterPro
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Monomeric isocitrate dehydrogenaseImported
    Gene namesi
    ORF Names:B739_1889Imported
    OrganismiRiemerella anatipestifer RA-CH-1Imported
    Taxonomic identifieri1228997 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
    ProteomesiUP000006276: Chromosome

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni132 – 1398Substrate bindingUniRule annotation

    Phylogenomic databases

    KOiK00031.

    Family and domain databases

    Gene3Di3.40.718.10. 3 hits.
    InterProiIPR004436. Isocitrate_DH_NADP_mono.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PfamiPF03971. IDH. 1 hit.
    [Graphical view]
    PIRSFiPIRSF009407. IDH_monmr. 1 hit.
    TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    J9R9T1-1 [UniParc]FASTAAdd to Basket

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    MSTAKIYYTL TDEAPMLATH SFLPIVKAFT KSADIQIEVP DISLSGRILA    50
    NFPEVLTEEQ RILDALTQLG ELATKPEANI IKLPNISASI PQLNEAIEEL 100
    QKKGFNVPNY PAEPKTEEEK EIKAKYAKVL GSAVNPVLRE GNSDRRAPKA 150
    VKNYAKANPH RIGEWKSDSK TDVAHMNQGD FYGTETSTTV EKDGKFKIVF 200
    FGNDGSEKVL KDYASLQAGE IIDSSVMNIK ALKTFVKEAI QEAKSRNVLL 250
    SAHLKATMMK VSDPIIFGAI VETFFQEVFE KYAETFKSLD VNPNDGLASL 300
    YDKIAGIAQE ADIKADIERV LNESSRVAMV NSDKGITNFH VPSDVIVDAS 350
    MAALVRGGGK MWNKDGQEED TLAIIPDRSY AGFYQAVIDD MKANGKLDPT 400
    TMGSVPNVGL MAKKAEEYGS HDKTFQMEAE GTVKVLNENN EVLLEQKVEA 450
    GDIFRMCQTK DAPIQDWVKL AVNRSRLSDT PAIFWLDKGR AHDREVIKKV 500
    EQYLKNYDTQ GLDIKILDVK DAMSETLKRA REGKDTISVS GNVLRDYLTD 550
    LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHIEQ FIEEGYLRWD 600
    SLGEFLALQA SLEHLAQTQN NTKAQVLADA LDEANAKFLA NDKSPARKIG 650
    SIDNRGSHFY LALYWAEALA AQTQDSELST LFQPIAKEMQ ENEAKINEEL 700
    IASQGKAQDI EGYYRPNEDK TYAAMRPSVT LNQIIDRI 738
    Length:738
    Mass (Da):81,660
    Last modified:November 28, 2012 - v1
    Checksum:i5C19A1856AAA51E2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003787 Genomic DNA. Translation: AFR36472.1.
    RefSeqiYP_006724372.1. NC_018609.1.

    Genome annotation databases

    EnsemblBacteriaiAFR36472; AFR36472; B739_1889.
    GeneIDi13716411.
    KEGGirag:B739_1889.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003787 Genomic DNA. Translation: AFR36472.1 .
    RefSeqi YP_006724372.1. NC_018609.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFR36472 ; AFR36472 ; B739_1889 .
    GeneIDi 13716411.
    KEGGi rag:B739_1889.

    Phylogenomic databases

    KOi K00031.

    Family and domain databases

    Gene3Di 3.40.718.10. 3 hits.
    InterProi IPR004436. Isocitrate_DH_NADP_mono.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    Pfami PF03971. IDH. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF009407. IDH_monmr. 1 hit.
    TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Riemerella anatipestifer vaccine strains."
      Chun C.A., Shu W.M., Kang Z.D., Jia W.X.
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: RA-CH-1Imported.

    Entry informationi

    Entry nameiJ9R9T1_RIEAN
    AccessioniPrimary (citable) accession number: J9R9T1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3