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J9R9T1

- J9R9T1_RIEAN

UniProt

J9R9T1 - J9R9T1_RIEAN

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Protein
Submitted name:

Monomeric isocitrate dehydrogenase

Gene
B739_1889
Organism
Riemerella anatipestifer RA-CH-1
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Cofactori

Binds 1 magnesium or manganese ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei145 – 1451Substrate By similarityUniRule annotation
Sitei255 – 2551Critical for catalysis By similarity
Metal bindingi348 – 3481Magnesium or manganese By similarityUniRule annotation
Sitei418 – 4181Critical for catalysis By similarityUniRule annotation
Binding sitei545 – 5451Substrate By similarityUniRule annotation
Metal bindingi546 – 5461Magnesium or manganese By similarityUniRule annotation
Metal bindingi550 – 5501Magnesium or manganese By similarityUniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: InterPro
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Monomeric isocitrate dehydrogenaseImported
Gene namesi
ORF Names:B739_1889Imported
OrganismiRiemerella anatipestifer RA-CH-1Imported
Taxonomic identifieri1228997 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
ProteomesiUP000006276: Chromosome

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni132 – 1398Substrate binding By similarityUniRule annotation

Phylogenomic databases

KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

J9R9T1-1 [UniParc]FASTAAdd to Basket

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MSTAKIYYTL TDEAPMLATH SFLPIVKAFT KSADIQIEVP DISLSGRILA    50
NFPEVLTEEQ RILDALTQLG ELATKPEANI IKLPNISASI PQLNEAIEEL 100
QKKGFNVPNY PAEPKTEEEK EIKAKYAKVL GSAVNPVLRE GNSDRRAPKA 150
VKNYAKANPH RIGEWKSDSK TDVAHMNQGD FYGTETSTTV EKDGKFKIVF 200
FGNDGSEKVL KDYASLQAGE IIDSSVMNIK ALKTFVKEAI QEAKSRNVLL 250
SAHLKATMMK VSDPIIFGAI VETFFQEVFE KYAETFKSLD VNPNDGLASL 300
YDKIAGIAQE ADIKADIERV LNESSRVAMV NSDKGITNFH VPSDVIVDAS 350
MAALVRGGGK MWNKDGQEED TLAIIPDRSY AGFYQAVIDD MKANGKLDPT 400
TMGSVPNVGL MAKKAEEYGS HDKTFQMEAE GTVKVLNENN EVLLEQKVEA 450
GDIFRMCQTK DAPIQDWVKL AVNRSRLSDT PAIFWLDKGR AHDREVIKKV 500
EQYLKNYDTQ GLDIKILDVK DAMSETLKRA REGKDTISVS GNVLRDYLTD 550
LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHIEQ FIEEGYLRWD 600
SLGEFLALQA SLEHLAQTQN NTKAQVLADA LDEANAKFLA NDKSPARKIG 650
SIDNRGSHFY LALYWAEALA AQTQDSELST LFQPIAKEMQ ENEAKINEEL 700
IASQGKAQDI EGYYRPNEDK TYAAMRPSVT LNQIIDRI 738
Length:738
Mass (Da):81,660
Last modified:November 28, 2012 - v1
Checksum:i5C19A1856AAA51E2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003787 Genomic DNA. Translation: AFR36472.1.
RefSeqiYP_006724372.1. NC_018609.1.

Genome annotation databases

EnsemblBacteriaiAFR36472; AFR36472; B739_1889.
GeneIDi13716411.
KEGGirag:B739_1889.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003787 Genomic DNA. Translation: AFR36472.1 .
RefSeqi YP_006724372.1. NC_018609.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFR36472 ; AFR36472 ; B739_1889 .
GeneIDi 13716411.
KEGGi rag:B739_1889.

Phylogenomic databases

KOi K00031.

Family and domain databases

Gene3Di 3.40.718.10. 3 hits.
InterProi IPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
Pfami PF03971. IDH. 1 hit.
[Graphical view ]
PIRSFi PIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Riemerella anatipestifer vaccine strains."
    Chun C.A., Shu W.M., Kang Z.D., Jia W.X.
    Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RA-CH-1Imported.

Entry informationi

Entry nameiJ9R9T1_RIEAN
AccessioniPrimary (citable) accession number: J9R9T1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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