SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

J9NZS7

- J9NZS7_CANFA

UniProt

J9NZS7 - J9NZS7_CANFA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Uncharacterized protein
Gene
LOC100855964
Organism
Canis familiaris (Dog) (Canis lupus familiaris)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
OrganismiCanis familiaris (Dog) (Canis lupus familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
ProteomesiUP000002254: Chromosome 10, UP000002254: Chromosome 31, UP000002254: Chromosome 5, UP000002254: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ZKRelectron microscopy8.7031-51[»]

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000014814.
KOiK02924.
OMAiWIRMRTN.
OrthoDBiEOG789CF5.
TreeFamiTF300223.

Family and domain databases

Gene3Di1.10.1620.10. 1 hit.
HAMAPiMF_00629. Ribosomal_L39e.
InterProiIPR000077. Ribosomal_L39.
IPR020083. Ribosomal_L39_CS.
IPR023626. Ribosomal_L39e_dom.
[Graphical view]
PANTHERiPTHR19970. PTHR19970. 1 hit.
PfamiPF00832. Ribosomal_L39. 1 hit.
[Graphical view]
SUPFAMiSSF48662. SSF48662. 1 hit.
PROSITEiPS00051. RIBOSOMAL_L39E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9NZS7-1 [UniParc]FASTAAdd to Basket

« Hide

MSSHKTFRIK RFLAKKQKQN RPIPQWIRMK TGNKIRYNSK RRHWRRTKLG   50
L 51
Length:51
Mass (Da):6,407
Last modified:October 31, 2012 - v1
Checksum:i2023CA8590C7752C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEX03003500 Genomic DNA. No translation available.
AAEX03005652 Genomic DNA. No translation available.
AAEX03007502 Genomic DNA. No translation available.
AAEX03016414 Genomic DNA. No translation available.
AAEX03017475 Genomic DNA. No translation available.
RefSeqiXP_003434034.1. XM_003433986.2.
XP_005619861.1. XM_005619804.1.
XP_005623370.1. XM_005623313.1.
XP_005626145.1. XM_005626088.1.
XP_005640037.1. XM_005639980.1.
XP_005641800.1. XM_005641743.1.

Genome annotation databases

EnsembliENSCAFT00000046102; ENSCAFP00000036947; ENSCAFG00000032101.
ENSCAFT00000047239; ENSCAFP00000037062; ENSCAFG00000031092.
ENSCAFT00000047528; ENSCAFP00000038797; ENSCAFG00000032122.
ENSCAFT00000047637; ENSCAFP00000040955; ENSCAFG00000029014.
ENSCAFT00000047989; ENSCAFP00000038711; ENSCAFG00000029524.
GeneIDi100682542.
100685611.
100685924.
100686103.
100687285.
100687749.
KEGGicfa:100682542.
cfa:100685611.
cfa:100685924.
cfa:100686103.
cfa:100687285.
cfa:100687749.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEX03003500 Genomic DNA. No translation available.
AAEX03005652 Genomic DNA. No translation available.
AAEX03007502 Genomic DNA. No translation available.
AAEX03016414 Genomic DNA. No translation available.
AAEX03017475 Genomic DNA. No translation available.
RefSeqi XP_003434034.1. XM_003433986.2.
XP_005619861.1. XM_005619804.1.
XP_005623370.1. XM_005623313.1.
XP_005626145.1. XM_005626088.1.
XP_005640037.1. XM_005639980.1.
XP_005641800.1. XM_005641743.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2ZKR electron microscopy 8.70 3 1-51 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSCAFT00000046102 ; ENSCAFP00000036947 ; ENSCAFG00000032101 .
ENSCAFT00000047239 ; ENSCAFP00000037062 ; ENSCAFG00000031092 .
ENSCAFT00000047528 ; ENSCAFP00000038797 ; ENSCAFG00000032122 .
ENSCAFT00000047637 ; ENSCAFP00000040955 ; ENSCAFG00000029014 .
ENSCAFT00000047989 ; ENSCAFP00000038711 ; ENSCAFG00000029524 .
GeneIDi 100682542.
100685611.
100685924.
100686103.
100687285.
100687749.
KEGGi cfa:100682542.
cfa:100685611.
cfa:100685924.
cfa:100686103.
cfa:100687285.
cfa:100687749.

Organism-specific databases

CTDi 6170.

Phylogenomic databases

GeneTreei ENSGT00390000014814.
KOi K02924.
OMAi WIRMRTN.
OrthoDBi EOG789CF5.
TreeFami TF300223.

Family and domain databases

Gene3Di 1.10.1620.10. 1 hit.
HAMAPi MF_00629. Ribosomal_L39e.
InterProi IPR000077. Ribosomal_L39.
IPR020083. Ribosomal_L39_CS.
IPR023626. Ribosomal_L39e_dom.
[Graphical view ]
PANTHERi PTHR19970. PTHR19970. 1 hit.
Pfami PF00832. Ribosomal_L39. 1 hit.
[Graphical view ]
SUPFAMi SSF48662. SSF48662. 1 hit.
PROSITEi PS00051. RIBOSOMAL_L39E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence, comparative analysis and haplotype structure of the domestic dog."
    Broad Sequencing Platform
    Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R.
    , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
    Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BoxerImported.
  2. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.70 ANGSTROMS).
  3. Ensembl
    Submitted (SEP-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: BoxerImported.

Entry informationi

Entry nameiJ9NZS7_CANFA
AccessioniPrimary (citable) accession number: J9NZS7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: May 14, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi