Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Tetratricopeptide repeat protein

Gene

EVA_04500

Organism
gut metagenome
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Tetratricopeptide repeat proteinImported
Gene namesi
ORF Names:EVA_04500Imported
Organismigut metagenomeImported
Taxonomic identifieri749906 [NCBI]
Taxonomic lineageiunclassified sequencesmetagenomesorganismal metagenomes

Family & Domainsi

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR010466. DUF1058.
IPR001452. SH3_domain.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF06347. SH3_4. 1 hit.
[Graphical view]
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50005. TPR. 1 hit.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J9GII3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRYMMIWTF LCCCFASLLA VTPVLEDADN AFLQKKYKEA IRAYETVLQQ
60 70 80 90 100
GENADIYYNL GNAYFRVNDL GRAVLSYERA LALAPADEDV RHNLEVCQAK
110 120 130 140 150
VANQFNLPSE MFFITWLRNL VMHRSCDAWG GYALFSLFLS LLAFGIFRYG
160 170 180 190 200
RALRLRQVAL GVAVLGVLCF VFCNIAAAWN WRSYAHDDRA VVVEPVALVK
210 220 230 240 250
DSQPKAELIM DLQPGVVVRV VEETLRGWML VELPNTKTGW LRSEAIEKVK
260 270
PAVQVPVETA ETAVLPAENG ENSKDDDR
Length:278
Mass (Da):31,407
Last modified:October 31, 2012 - v1
Checksum:i3C5091F0E56C1425
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMCI01000888 Genomic DNA. Translation: EJX07392.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMCI01000888 Genomic DNA. Translation: EJX07392.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR010466. DUF1058.
IPR001452. SH3_domain.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF06347. SH3_4. 1 hit.
[Graphical view]
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50005. TPR. 1 hit.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered iberian lynx."
    Alcaide M., Messina E., Richter M., Bargiela R., Peplies J., Huws S.A., Newbold C.J., Golyshin P.N., Simon M.A., Lopez G., Yakimov M.M., Ferrer M.
    PLoS ONE 7:E51521-E51521(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiJ9GII3_9ZZZZ
AccessioniPrimary (citable) accession number: J9GII3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: October 29, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.