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J7SAX4 (J7SAX4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-B EMBL CCK73129.1
OrganismHomo sapiens (Human) EMBL CCK73129.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length273 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CCK73129.1
Non-terminal residue2731 EMBL CCK73129.1

Sequences

Sequence LengthMass (Da)Tools
J7SAX4 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: B1F6942350D9FE7E

FASTA27331,632
        10         20         30         40         50         60 
SHSMRYFYTA MSRPGRGEPR FITVGYVDDT QFVRFDSDAT SPRMAPRAPW IEQEGPEYWD 

        70         80         90        100        110        120 
RETQISKTNT QTYRENLRTA LRYYNQSEAG SHIIQRMYGC DLGPDGRLLR GHNQLAYDGK 

       130        140        150        160        170        180 
DYIALNEDLS SWTAADTAAQ ITQLKWEAAR VAEQLRAYLE GECVEWLRRY LENGKETLQR 

       190        200        210        220        230        240 
ADPPKTHVTH HSISDHEATL RCWALGFYPA EITLTWQRDG EDQTQDTELV ETRPAGDRTF 

       250        260        270 
QKWAAVVVPS GEEQRYTCHV QHEGLPKPLT LRW 

« Hide

References

[1]"Identification of a novel HLA allele."
Liu X., Wang L., Zhang B.L., Xia C., Bi J., Cheng L., Li L., Liu F., Lan G.X., Zhang X.P.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Blood EMBL CCK73129.1.
[2]Lu J.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Blood EMBL CCK73129.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE978333 Genomic DNA. Translation: CCK73129.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-B. human.

Entry information

Entry nameJ7SAX4_HUMAN
AccessionPrimary (citable) accession number: J7SAX4
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.