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Protein
Submitted name:

DNA ligase

Gene

BN148_1669c

Organism
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:BN148_1669cImported
OrganismiCampylobacter jejuni subsp. jejuni NCTC 11168-BN148Imported
Taxonomic identifieri1211776 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000003927: Chromosome

Structurei

3D structure databases

ProteinModelPortaliJ7RSU6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

J7RSU6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRFVFLICCA CLVFANEILL LSKFDKQDFN SKDFNAYLMS EKLDGVRGIW
60 70 80 90 100
DGKYLKTRQN YKIKTPDFFT KNFPPFAIDG ELWIARNKFD EISALIRSGD
110 120 130 140 150
SNLTLWKEVT YNIFDVPNAC EEFQISTCTL KNRLAVLEEY LQKYPSAYIK
160 170 180 190 200
IISQIPVENQ NNLNQFYESI IKNQGEGIVI RKNLSPYEKG RSKNATKLKP
210 220 230 240 250
YDDAECELVG FRKGKGKFEN QVGALLCKMP NGQIIKIGSG LKDEDRKNPP
260 270 280
KIGSIVTYKF NGLTKNSLPR FPVFLRIRDE NP
Length:282
Mass (Da):32,463
Last modified:October 31, 2012 - v1
Checksum:i305F01623AB5BF76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE978252 Genomic DNA. Translation: CCK67742.1.
RefSeqiYP_006633784.1. NC_018521.1.

Genome annotation databases

EnsemblBacteriaiCCK67742; CCK67742; BN148_1669c.
GeneIDi13531590.
KEGGicjb:BN148_1669c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE978252 Genomic DNA. Translation: CCK67742.1.
RefSeqiYP_006633784.1. NC_018521.1.

3D structure databases

ProteinModelPortaliJ7RSU6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCK67742; CCK67742; BN148_1669c.
GeneIDi13531590.
KEGGicjb:BN148_1669c.

Phylogenomic databases

KOiK01971.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of a Variant of Campylobacter jejuni NCTC 11168."
    Revez J., Schott T., Rossi M., Hanninen M.L.
    J. Bacteriol. 194:6298-6299(2012)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCTC 11168-BN148Imported.

Entry informationi

Entry nameiJ7RSU6_CAMJE
AccessioniPrimary (citable) accession number: J7RSU6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: January 7, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.