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J7PS39 (J7PS39_LISMN) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CBY71341.1
Gene names
Name:gadB EMBL CBY71341.1
ORF Names:LMOATCC19117_2442 EMBL CBY71341.1
OrganismListeria monocytogenes ATCC 19117 [Complete proteome] EMBL CBY71341.1
Taxonomic identifier882095 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
J7PS39 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: C6DBC24F9CF06496

FASTA46753,662
        10         20         30         40         50         60 
MLYSEDDKRK QESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ LMDEGNARQN 

        70         80         90        100        110        120 
LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR CVNILADLWN APKDMSYLGT 

       130        140        150        160        170        180 
STVGSSEACM LGGLAMKFRW RNHAEKRGLD IQAKRPNLII SSGYQVCWEK FCVYWDVDMR 

       190        200        210        220        230        240 
VVPMDKEHLS IDVDKVFDLV DEYTIGIVGI LGITYTGKFD DIQLLDEKVE AYNEANEHQL 

       250        260        270        280        290        300 
VIHVDGASGA MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 

       310        320        330        340        350        360 
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK TALYLAKSVE 

       370        380        390        400        410        420 
KSGYFEIIND GANLPIVCYK MKEGLDVEWT LYDLADQLLM KGWQVPAYPL PADLSDTIIQ 

       430        440        450        460 
RFVCRADLGY NVAEEFAVDF ADALHNLEHA RVLYHDKERN DSYGFTH 

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References

[1]"Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome."
Kuenne C., Billion A., Mraheil M.A., Strittmatter A., Daniel R., Goesmann A., Barbuddhe S., Hain T., Chakraborty T.
BMC Genomics 14:47-47(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 19117 EMBL CBY71341.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR733643 Genomic DNA. Translation: CBY71341.1.
RefSeqYP_006674243.1. NC_018584.1.

3D structure databases

ProteinModelPortalJ7PS39.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBY71341; CBY71341; LMOATCC19117_2442.
GeneID13641438.
KEGGlmoa:LMOATCC19117_2442.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ7PS39_LISMN
AccessionPrimary (citable) accession number: J7PS39
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: January 22, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)