J7PF35 (J7PF35_LISMN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL CBY66964.1
ORF Names:	LMOL312_0886 EMBL CBY66964.1

Organism

Listeria monocytogenes L312 EMBL CBY66964.1

Taxonomic identifier

882094 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria monocytogenes

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL CBY66964.1
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	J7PF35 [UniParc]. Last modified October 31, 2012. Version 1. Checksum: FA192B48C2D9BC3B	FASTA	368	41,054
	10 20 30 40 50 60 MVTGWHRPTW IEIDRAAIRE NIKNEQNKLP ENVDLWAVVK ANAYGHGIIE VARTAKEAGA 70 80 90 100 110 120 KGFCVAILDE ALALREAGFQ DDFILVLGAT RKEDANLAAK NHISLTVFRE DWLEDLTLEA 130 140 150 160 170 180 PLRIHLKVDS GMGRLGIRTT DEARRIETTI AKDNQLQLEG IYTHFATADQ LETSYFEQQL 190 200 210 220 230 240 AKFQTILTSL KNRPTYVHTA NSAASLLQPQ IGFDAIRFGI SMYGLTPSTE IKTSLPFELK 250 260 270 280 290 300 PALALYTEMV HVKELAPGDS VSYGATYTAT EREWVATLPI GYADGLIRHY SGFHVLVDGE 310 320 330 340 350 360 LAPIIGRVCM DQTIIKLPRE FQTGSKVTII GTDHGNTITA DDAAHYLDTI NYEVTCLLNE RIPRKYIH

References

[1]

"The genome sequences of 11 strains of Listeria monocytogenes covering all known serotypes." Kuenne C., Billion A., Pischimarov J., Oehm S., Voget S., Goesmann A., Daniel R., Hain T., Chakraborty T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: L312 EMBL CBY66964.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR733642 Genomic DNA. Translation: CBY66964.1.
RefSeq	YP_006754015.1. NC_018642.1.
3D structure databases
ProteinModelPortal	J7PF35.
SMR	J7PF35. Positions 4-367.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBY66964; CBY66964; LMOL312_0886.
GeneID	13685402.
KEGG	lmol:LMOL312_0886.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

J7PF35_LISMN

Accession

Primary (citable) accession number: J7PF35

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2012
Last sequence update:	October 31, 2012
Last modified:	May 1, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)