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J7N2U4 (J7N2U4_LISMN) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CBY52905.1
Gene names
Name:gadB EMBL CBY52905.1
ORF Names:LMOSLCC5850_2436 EMBL CBY52905.1
OrganismListeria monocytogenes SLCC5850 [Complete proteome] EMBL CBY52905.1
Taxonomic identifier882096 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
J7N2U4 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 3DEF1036B7BD94F4

FASTA46753,655
        10         20         30         40         50         60 
MLYSEDDKRK QESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ LMDEGNARQN 

        70         80         90        100        110        120 
LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR CVNILADLWN APKDMSYLGT 

       130        140        150        160        170        180 
STVGSSEACM LGGLAMKFRW RNNAEKRGLD IQAKRPNLII SSGYQVCWEK FCVYWDVDMR 

       190        200        210        220        230        240 
VVPMDKDHLS LDVDKVFDLV DEYTIGIVGI LGITYTGKFD DIQLLDEKVE AYNETNEHQL 

       250        260        270        280        290        300 
VIHIDGASGA MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 

       310        320        330        340        350        360 
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK TALYLAKTVE 

       370        380        390        400        410        420 
KSGYFEIIND GANLPIVCYK MKEGLDVEWT LYDLADQLLM KGWQVPAYPL PADLSDTIIQ 

       430        440        450        460 
RFVCRADLGY NVAEEFAADF ADAIHNLEHA RVLYHDKERN DSYGFTH 

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References

[1]"Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome."
Kuenne C., Billion A., Mraheil M.A., Strittmatter A., Daniel R., Goesmann A., Barbuddhe S., Hain T., Chakraborty T.
BMC Genomics 14:47-47(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SLCC5850 EMBL CBY52905.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR733647 Genomic DNA. Translation: CBY52905.1.
RefSeqYP_006697263.1. NC_018592.1.

3D structure databases

ProteinModelPortalJ7N2U4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBY52905; CBY52905; LMOSLCC5850_2436.
GeneID13626179.
KEGGlmoc:LMOSLCC5850_2436.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ7N2U4_LISMN
AccessionPrimary (citable) accession number: J7N2U4
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)