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J7M0E9 (J7M0E9_9MICC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AFR30984.1
Gene names
Name:gadB EMBL AFR30984.1
ORF Names:ARUE_c41120 EMBL AFR30984.1
OrganismArthrobacter sp. Rue61a [Complete proteome] EMBL AFR30984.1
Taxonomic identifier1118963 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
J7M0E9 [UniParc].

Last modified October 31, 2012. Version 1.
Checksum: 1DDE5EC7F0FD2D71

FASTA46652,017
        10         20         30         40         50         60 
MSRSHRASQH EPDTAVELNP LFSRPGESTI FPRFTLPDGE SLPATAYQVV HDEAMLDGNS 

        70         80         90        100        110        120 
RLNLATFVGT WMETEASKLY AETFDKNMID KDEYPQTALI ETRCWRMLAD LWNAPDPEKS 

       130        140        150        160        170        180 
IGTSTIGSSE ACMLGGLALK RRWQHARRAA GKSTEKPNLI LSSAVQVCWE KFCNYWDVEP 

       190        200        210        220        230        240 
RFVPVSAEHP TLDGHDLDQY VDENTIGVVA ILGVTYTGKY EPVELISDAL DEIQARHGLD 

       250        260        270        280        290        300 
IPIHVDGASG AMVAPFLQPE TVWDFRLPRV ASINTSGHKY GLVYPGLGWV VWRDAAALPE 

       310        320        330        340        350        360 
DLIFHVSYLG GDMPTFALNF SRPGAQVLLQ YYLFLRLGFA GYRSVQATSR DVALYLSSEI 

       370        380        390        400        410        420 
GAMDAFTLWS DGSDIPVFAW QLSDGHTEHW NLHHLSERLR MNGWLVPAYP LPDGLGDVTV 

       430        440        450        460 
QRIVVRNGFT RDLASSFLAD LKKEVDYLDS LTAPMPTDKQ AEGFHH 

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References

[1]"Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a."
Niewerth H., Schuldes J., Parschat K., Kiefer P., Vorholt J.A., Daniel R., Fetzner S.
BMC Genomics 13:534-534(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Rue61a EMBL AFR30984.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003203 Genomic DNA. Translation: AFR30984.1.
RefSeqYP_006664022.1. NC_018531.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFR30984; AFR30984; ARUE_c41120.
GeneID13560689.
KEGGarr:ARUE_c41120.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameJ7M0E9_9MICC
AccessionPrimary (citable) accession number: J7M0E9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2012
Last sequence update: October 31, 2012
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)